Detailed information NTG1112623

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: KHO07_RS26900
• Genome accession: NZ_HG995459
• Coordinates: 5944813..5946888 (-)
• Length: 691 a.a.
• NCBI ID: WP_150735556.1
• Uniprot ID: A0A5E7NQZ4
• Organism: Pseudomonas sp. PP3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5939813..5951888

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KHO07_RS26885	-	5941435..5943027 (-)	1593	WP_150735558.1	AAA family ATPase	-
KHO07_RS26890	aroB	5943038..5944138 (-)	1101	WP_075947241.1	3-dehydroquinate synthase	-
KHO07_RS26895	aroK	5944290..5944808 (-)	519	WP_150735557.1	shikimate kinase AroK	-
KHO07_RS26900	pilQ	5944813..5946888 (-)	2076	WP_150735556.1	type IV pilus secretin PilQ	Machinery gene
KHO07_RS26905	-	5946902..5947429 (-)	528	WP_212625988.1	pilus assembly protein PilP	-
KHO07_RS26910	pilO	5947426..5948049 (-)	624	WP_212625989.1	type 4a pilus biogenesis protein PilO	-
KHO07_RS26915	-	5948046..5948612 (-)	567	WP_150735553.1	PilN domain-containing protein	-
KHO07_RS26920	comM	5948612..5949673 (-)	1062	WP_150735552.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 691 a.a.
• Molecular weight: 74982.30 Da
• Isoelectric Point: 5.4266

>NTDB_id=1112623 KHO07_RS26900 WP_150735556.1 5944813..5946888(-) (pilQ) [Pseudomonas sp. PP3]
MNRIFSTLGMSLWIALLSPMVQAANLKALDVAALPGDRVELKLGFDEPPPSPNGYTTESPARIAIDLPGVISQLTSKTRD
LGAGNARSATVVEAKDRTRLIINLTQLTPYSTRVEGNNLFVVVGQGGKSAVSRPIVTAIPAKSPVRPVASAGKAIRGVDF
QRGTQGEGNVVIDLSDPSIAPDIQEREGKIILGFARTRLPEPLRVRLDVKDFATPVQFVNANATGDRATITIEPSGAFDY
STYQTDNKLTVSIRPMTADDLQKRNADRYAYSGEKLSLNFQDIDVRSVLQLIADFTNLNLVASDTVQGGITLRLQNVPWD
QALDLVLKTKGLDKRKIGNVLLVAPADEIAARERQELESQKQIAELAPLRRELLQVNYAKAADIAKLFQSVTSAEAKIDE
RGSITVDERTNNIIAYQTQDRLDELRRIVAQLDIPVRQVMIEARIVEANVDYDKSLGVRWGGSIQNKGNWNTSGVSNGAN
ASSTIGTPGSTSTNSPFVDLGAVNNTSGIGIAFITDNVLLDLELTAMEKTGNGEIVSQPKVVTSDKETAKILKGTEIPYQ
EASSSGATSVSFKEASLSLEVTPQITPDNRIIMEVKVTKDEPDYLNKVQDVPPIKKNEVNAKVLVNDGETIVIGGVFSNT
QSKVVDKVPFLGDVPYLGRLFRRDVVSEKKSELLVFLTPRIMNNQAIAVSR

Nucleotide

• Length: 2076 bp

>NTDB_id=1112623 KHO07_RS26900 WP_150735556.1 5944813..5946888(-) (pilQ) [Pseudomonas sp. PP3]
ATGAACAGGATTTTCTCCACCCTCGGAATGTCGCTATGGATAGCGTTGCTGTCGCCGATGGTACAAGCGGCCAATCTCAA
GGCGCTGGATGTTGCAGCGCTGCCAGGCGACCGCGTCGAGTTGAAGTTGGGGTTCGATGAGCCACCGCCGTCGCCCAATG
GTTACACCACGGAGTCACCCGCGCGGATCGCAATCGATCTGCCTGGCGTGATCAGCCAGTTGACCAGCAAGACCCGTGAT
CTGGGCGCCGGCAACGCCCGCAGCGCAACAGTGGTCGAGGCCAAGGACCGTACGCGGCTGATCATTAATCTGACCCAGCT
GACGCCGTACAGCACGCGCGTCGAAGGCAACAACCTGTTCGTCGTGGTCGGGCAGGGTGGCAAAAGCGCCGTATCGCGAC
CGATCGTCACCGCCATTCCGGCCAAGTCTCCGGTGCGCCCGGTTGCGTCGGCAGGCAAGGCCATCCGCGGCGTGGACTTC
CAGCGGGGCACTCAGGGTGAAGGCAATGTGGTAATCGATTTGTCGGATCCTTCCATTGCGCCCGACATCCAGGAGCGCGA
GGGCAAGATCATTCTCGGTTTCGCCAGGACCCGTTTGCCCGAGCCATTGCGAGTGCGCCTGGACGTCAAGGATTTCGCCA
CGCCGGTGCAGTTCGTCAATGCCAATGCCACCGGCGACAGAGCCACTATCACCATCGAGCCCAGCGGGGCCTTCGATTAT
TCGACCTACCAGACCGATAACAAGCTGACCGTCAGCATCCGCCCGATGACCGCCGACGACCTGCAAAAACGTAACGCCGA
CCGCTACGCCTATAGCGGTGAAAAGCTCTCGCTGAACTTCCAGGACATCGATGTGCGCTCGGTGCTGCAATTGATCGCCG
ATTTTACCAACCTCAATCTGGTGGCCAGCGACACGGTGCAAGGCGGCATTACCCTGCGCCTGCAAAACGTCCCCTGGGAC
CAGGCACTGGATCTGGTGCTGAAAACCAAGGGCCTGGACAAGCGCAAAATCGGCAATGTCCTGTTGGTGGCGCCTGCCGA
TGAAATTGCCGCTCGTGAACGCCAGGAACTGGAGTCGCAGAAGCAAATCGCCGAACTCGCGCCGCTGCGTCGCGAGCTGC
TTCAGGTCAACTATGCCAAGGCGGCCGATATCGCCAAGCTGTTCCAGTCGGTGACCAGTGCCGAGGCGAAAATCGACGAA
CGGGGTTCGATCACTGTCGATGAGCGCACTAACAACATCATCGCCTACCAGACCCAGGACCGACTCGACGAGCTGCGTCG
GATCGTGGCGCAACTGGATATCCCGGTGCGGCAAGTAATGATCGAGGCGCGCATCGTCGAAGCCAACGTCGATTACGACA
AAAGCCTGGGCGTGCGCTGGGGGGGCTCGATCCAGAACAAGGGCAACTGGAATACCTCCGGCGTCAGCAACGGTGCCAAT
GCGTCATCGACCATCGGCACGCCGGGCAGCACCAGCACCAATTCACCGTTCGTCGACCTGGGGGCAGTCAACAATACCTC
GGGAATCGGCATTGCCTTCATCACTGACAATGTCTTGCTGGACCTTGAGCTGACCGCCATGGAGAAAACCGGTAACGGCG
AAATCGTCTCGCAACCCAAGGTGGTCACGTCCGACAAGGAAACGGCGAAGATTCTCAAGGGCACCGAGATTCCCTATCAG
GAAGCCAGCTCCAGCGGCGCCACGTCCGTATCGTTCAAGGAGGCTTCGCTGTCGCTGGAGGTCACCCCGCAAATCACGCC
GGACAACCGGATCATCATGGAGGTGAAGGTCACCAAGGACGAGCCGGACTACCTGAACAAGGTCCAGGATGTGCCGCCGA
TCAAGAAAAACGAAGTCAACGCCAAAGTCCTGGTCAACGATGGCGAGACCATCGTCATTGGTGGTGTTTTCTCAAATACT
CAGAGCAAGGTTGTAGATAAGGTGCCATTTCTTGGCGATGTGCCGTATCTTGGCCGCCTTTTCCGGCGTGACGTGGTTTC
GGAGAAAAAATCCGAGCTGTTGGTGTTTCTCACTCCGCGTATCATGAATAACCAGGCGATTGCTGTGAGTCGTTGA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (526-682)

• Bacterial type II/III secretion system short domain (Secretin_N) (373-438)

• AMIN domain (AMIN) (38-122)

• Secretin and TonB N terminus short domain (STN) (299-345)

3D structure

• AlphaFold DB: A0A5E7NQZ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Pseudomonas aeruginosa PAK	73.706	100	0.763
comQ	Acinetobacter baylyi ADP1	40.89	100	0.412
pilQ	Acinetobacter baumannii strain A118	38.41	100	0.412
pilQ	Acinetobacter baumannii D1279779	38.41	100	0.412
pilQ	Legionella pneumophila strain Lp02	38.552	97.974	0.378
pilQ	Legionella pneumophila strain ERS1305867	38.576	97.54	0.376