Detailed information
Bioinformatically predicted
Overview
| Name | comD/comD3 | Type | Regulator |
| Locus tag | HMPREF9319_RS11215 | Genome accession | NZ_GL397128 |
| Coordinates | 1826879..1827193 (-) | Length | 104 a.a. |
| NCBI ID | WP_003066552.1 | Uniprot ID | E0PG50 |
| Organism | Streptococcus equinus ATCC 700338 | ||
| Function | phosphorylation of ComE (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1821879..1832193
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HMPREF9319_RS08720 (HMPREF9319_1818) | rmuC | 1822635..1823909 (-) | 1275 | WP_003066543.1 | DNA recombination protein RmuC | - |
| HMPREF9319_RS08725 (HMPREF9319_1819) | - | 1823911..1824540 (-) | 630 | WP_003066545.1 | thiamine diphosphokinase | - |
| HMPREF9319_RS08730 (HMPREF9319_1820) | rpe | 1824533..1825195 (-) | 663 | WP_003066548.1 | ribulose-phosphate 3-epimerase | - |
| HMPREF9319_RS08735 (HMPREF9319_1821) | rsgA | 1825202..1826074 (-) | 873 | WP_003066549.1 | ribosome small subunit-dependent GTPase A | - |
| HMPREF9319_RS08750 (HMPREF9319_1822) | - | 1826520..1826747 (-) | 228 | WP_003066551.1 | hypothetical protein | - |
| HMPREF9319_RS11215 (HMPREF9319_1823) | comD/comD3 | 1826879..1827193 (-) | 315 | WP_003066552.1 | GHKL domain-containing protein | Regulator |
| HMPREF9319_RS11220 | - | 1827373..1827582 (-) | 210 | WP_231729916.1 | hypothetical protein | - |
| HMPREF9319_RS10840 (HMPREF9319_1826) | comE/comE2 | 1827595..1827816 (-) | 222 | WP_003066558.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | Regulator |
| HMPREF9319_RS08760 (HMPREF9319_1827) | - | 1827788..1828150 (-) | 363 | WP_003066560.1 | bacteriocin immunity protein | - |
| HMPREF9319_RS08770 (HMPREF9319_1829) | - | 1828707..1829018 (-) | 312 | WP_003066564.1 | bacteriocin immunity protein | - |
| HMPREF9319_RS08775 (HMPREF9319_1830) | - | 1829776..1829913 (+) | 138 | WP_003066566.1 | hypothetical protein | - |
| HMPREF9319_RS08780 (HMPREF9319_1831) | - | 1829935..1831242 (-) | 1308 | WP_003066569.1 | sensor histidine kinase | - |
| HMPREF9319_RS08785 (HMPREF9319_1832) | comE/comE1 | 1831250..1831933 (-) | 684 | WP_003066571.1 | response regulator transcription factor | Regulator |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11894.38 Da Isoelectric Point: 4.6112
>NTDB_id=1111715 HMPREF9319_RS11215 WP_003066552.1 1826879..1827193(-) (comD/comD3) [Streptococcus equinus ATCC 700338]
MDCFEIPRITYIHNLAILFDNRIEAAVLSDVPKISVANFYQDDNFVFMIENSTKEDSIPIDTVYQKGYSSKGDNRSIGLA
TVIEFHQEYGKLPIETSSSNHLFR
MDCFEIPRITYIHNLAILFDNRIEAAVLSDVPKISVANFYQDDNFVFMIENSTKEDSIPIDTVYQKGYSSKGDNRSIGLA
TVIEFHQEYGKLPIETSSSNHLFR
Nucleotide
Download Length: 315 bp
>NTDB_id=1111715 HMPREF9319_RS11215 WP_003066552.1 1826879..1827193(-) (comD/comD3) [Streptococcus equinus ATCC 700338]
ATGGATTGTTTCGAAATTCCACGTATTACCTACATTCATAACCTTGCTATTCTGTTTGATAATAGGATTGAAGCCGCAGT
ATTATCAGATGTTCCTAAAATATCCGTAGCGAATTTTTATCAAGATGATAACTTTGTTTTTATGATTGAAAATTCAACCA
AAGAAGATAGTATTCCGATTGATACCGTTTATCAAAAAGGCTATTCAAGCAAAGGTGATAATCGTAGTATTGGCTTAGCA
ACAGTTATTGAATTTCATCAAGAATATGGCAAGCTACCCATTGAAACAAGCAGCTCAAATCACCTCTTTAGATAA
ATGGATTGTTTCGAAATTCCACGTATTACCTACATTCATAACCTTGCTATTCTGTTTGATAATAGGATTGAAGCCGCAGT
ATTATCAGATGTTCCTAAAATATCCGTAGCGAATTTTTATCAAGATGATAACTTTGTTTTTATGATTGAAAATTCAACCA
AAGAAGATAGTATTCCGATTGATACCGTTTATCAAAAAGGCTATTCAAGCAAAGGTGATAATCGTAGTATTGGCTTAGCA
ACAGTTATTGAATTTCATCAAGAATATGGCAAGCTACCCATTGAAACAAGCAGCTCAAATCACCTCTTTAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comD/comD3 | Streptococcus equinus JB1 |
58.586 |
95.192 |
0.558 |
| comD/comD2 | Streptococcus equinus JB1 |
54.369 |
99.038 |
0.538 |
| comD/comD1 | Streptococcus equinus JB1 |
48.98 |
94.231 |
0.462 |
| comD/blpH | Streptococcus mutans UA159 |
43 |
96.154 |
0.413 |