Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ACN076_RS10010 Genome accession   NZ_CP184836
Coordinates   2010590..2012086 (-) Length   498 a.a.
NCBI ID   WP_060806096.1    Uniprot ID   A0A2I1UD59
Organism   Streptococcus sp. K0074     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 2005590..2017086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS09990 (ACN076_09990) - 2006219..2007196 (-) 978 WP_420789923.1 ABC transporter substrate binding protein -
  ACN076_RS09995 (ACN076_09995) amiF 2007651..2008577 (-) 927 WP_001291284.1 ATP-binding cassette domain-containing protein Regulator
  ACN076_RS10000 (ACN076_10000) amiE 2008588..2009655 (-) 1068 WP_000159550.1 ABC transporter ATP-binding protein Regulator
  ACN076_RS10005 (ACN076_10005) amiD 2009664..2010590 (-) 927 WP_000103703.1 oligopeptide ABC transporter permease OppC Regulator
  ACN076_RS10010 (ACN076_10010) amiC 2010590..2012086 (-) 1497 WP_060806096.1 ABC transporter permease Regulator
  ACN076_RS10015 (ACN076_10015) amiA3 2012153..2014141 (-) 1989 WP_420789924.1 peptide ABC transporter substrate-binding protein Regulator
  ACN076_RS10025 (ACN076_10025) - 2014576..2015907 (-) 1332 WP_101786092.1 hemolysin family protein -
  ACN076_RS10030 (ACN076_10030) endA 2016062..2016886 (-) 825 WP_101786094.1 DNA-entry nuclease EndA Machinery gene

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55654.13 Da        Isoelectric Point: 9.3386

>NTDB_id=1111479 ACN076_RS10010 WP_060806096.1 2010590..2012086(-) (amiC) [Streptococcus sp. K0074]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTADKRDNYENTVYERMGYIEYYDTKELQEKAS
QMDASVTVEANDTNKAIYEKYIKQIGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNINLGDSYPTYANSPVLQVITQGQGQTKTAQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVANYGKDDPYTATESNYQYPSMIASSAVVGLIGLVISYAIAVPLGSAMARFKNTWIDSFSTGA
LTFLMALPTIALVYIVRLAGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=1111479 ACN076_RS10010 WP_060806096.1 2010590..2012086(-) (amiC) [Streptococcus sp. K0074]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCTATCTTCTTAGTAACAACTTTGACTTACACGATTAT
CTATACAATGGTTCCTCGAAAATTGATTTTCAAACAGGACACCAACTATAACAAGATTGCGACAACTGCTGATAAACGTG
ATAACTATGAGAATACTGTTTATGAGCGTATGGGCTATATCGAGTACTACGATACCAAAGAGTTGCAAGAAAAAGCTAGC
CAGATGGATGCTTCTGTAACAGTTGAAGCTAATGATACCAATAAGGCTATCTATGAAAAATACATCAAACAAATCGGTCA
TGGTTGGACCTTGGGAGAATTTACTGAAAGTGGCCAATTCTACGCTACTCGTGAAATCCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGATCATACAAATAAAATTCAAGACCCTGAAAATCCAGACTTGAAGCGTTATCTT
CGTTTCGAAAACGATCCAGCGATCGGATGGTCATTGGTTGGTTCAGGAACTAAACACAAATATCTCTTGTACTTCAACAG
TCAGTTCCCATTTGTGCATCAAAACTTTGTGAACATTAATTTAGGTGACTCTTATCCAACCTATGCTAATAGCCCTGTTT
TACAGGTTATTACTCAGGGGCAAGGGCAAACAAAAACTGCTCAAGTTCAGTTCCCAACAGGTAAGAAAACTTCTTCTGTA
AATATTTACTCAAGAACCTACAAATCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAATTATGGGAAAGATGATCCATA
TACTGCAACTGAAAGCAACTACCAATATCCTTCTATGATTGCTAGCTCTGCAGTCGTTGGATTGATCGGTTTGGTGATTT
CTTATGCGATTGCCGTGCCACTTGGTTCAGCAATGGCTCGCTTCAAGAATACTTGGATTGATAGCTTCTCAACAGGGGCT
TTGACCTTCTTGATGGCTCTTCCAACAATTGCCTTGGTTTATATCGTTCGTTTGGCTGGTTCTTCAATCGGCTTACCAGA
TTCATTCCCTATCTTGGGTGCTGGAGATTGGCGTTCTTACGTTTTACCAGCAGTTATCCTTGGTTTGTTGGGTGCTCCGG
GTACAGCCATTTGGATTCGTCGTTATATGATTGACTTGCAATCACAGGACTTTGTTCGTTTTGCTCGTGCCAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACACATCTTTAAAAATGCCATGGTTCCACTGGTTTCAGGAATTCCTGGTGCCGTTAT
CGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTTGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACTTCTTTTGGGAGAT
ATTTGGATGACGATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2I1UD59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.305

100

0.763
  amiC Streptococcus thermophilus LMG 18311

76.104

100

0.761
  amiC Streptococcus thermophilus LMD-9

75.703

100

0.757

Multiple sequence alignment