Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ACN076_RS10000 Genome accession   NZ_CP184836
Coordinates   2008588..2009655 (-) Length   355 a.a.
NCBI ID   WP_000159550.1    Uniprot ID   F9HAA0
Organism   Streptococcus sp. K0074     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2003588..2014655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN076_RS09975 (ACN076_09975) - 2003924..2004172 (-) 249 WP_000364990.1 YneF family protein -
  ACN076_RS09980 (ACN076_09980) - 2004498..2005301 (-) 804 WP_000157661.1 ABC transporter ATP-binding protein -
  ACN076_RS09985 (ACN076_09985) - 2005314..2006207 (-) 894 WP_001012086.1 ABC transporter permease -
  ACN076_RS09990 (ACN076_09990) - 2006219..2007196 (-) 978 WP_420789923.1 ABC transporter substrate binding protein -
  ACN076_RS09995 (ACN076_09995) amiF 2007651..2008577 (-) 927 WP_001291284.1 ATP-binding cassette domain-containing protein Regulator
  ACN076_RS10000 (ACN076_10000) amiE 2008588..2009655 (-) 1068 WP_000159550.1 ABC transporter ATP-binding protein Regulator
  ACN076_RS10005 (ACN076_10005) amiD 2009664..2010590 (-) 927 WP_000103703.1 oligopeptide ABC transporter permease OppC Regulator
  ACN076_RS10010 (ACN076_10010) amiC 2010590..2012086 (-) 1497 WP_060806096.1 ABC transporter permease Regulator
  ACN076_RS10015 (ACN076_10015) amiA3 2012153..2014141 (-) 1989 WP_420789924.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39491.07 Da        Isoelectric Point: 4.8078

>NTDB_id=1111477 ACN076_RS10000 WP_000159550.1 2008588..2009655(-) (amiE) [Streptococcus sp. K0074]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFDEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=1111477 ACN076_RS10000 WP_000159550.1 2008588..2009655(-) (amiE) [Streptococcus sp. K0074]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTTGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGAAAATCTGTTT
TGACAAAGACTTTCACAGGTATGCTTGAAGAAAATGGTCGCATTGCCCAAGGTAGTATTGACTACCGTGGTCAGGATTTG
ACAGCCTTGTCTTCTCACAAGGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACGATCTTCCAAGATCCAATGACTAG
TTTGGACCCAATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGGATTCCAGATGCAGATAGACGTTTTGATGAATACCCGTTCCAATAT
TCTGGGGGAATGCGTCAACGTATCGTTATTGCGATTGCCCTTGCCTGCCGACCTGATGTCTTGATCTGTGATGAGCCAAC
GACTGCCTTGGATGTGACTATCCAAGCACAAATCATTGATTTGCTAAAATCTTTACAAAACGAGTATCATTTCACAACAA
TCTTTATCACCCACGACCTTGGTGTGGTAGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCAGGAGAAATCGTTGAA
TATGGAACTGTTGAGGAAGTCTTCTATGATCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCCTTTGCCT
TGCGTTCAGACTATGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTACTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCATGATAAGATTCGTGAAAA
AATGGGATTTGCCCATCTGGCTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAA0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

87.887

100

0.879

  amiE Streptococcus thermophilus LMG 18311

86.197

100

0.862

  amiE Streptococcus thermophilus LMD-9

86.197

100

0.862

  oppD Streptococcus mutans UA159

54.261

99.155

0.538


Multiple sequence alignment