Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DP15_RS02130 Genome accession   NZ_CP008926
Coordinates   433185..433367 (-) Length   60 a.a.
NCBI ID   WP_011017399.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain ATCC 19615     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 428185..438367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DP15_RS02110 (DP15_430) gpsB 429137..429463 (-) 327 WP_002983626.1 cell division regulator GpsB -
  DP15_RS02115 (DP15_431) - 429585..430100 (-) 516 WP_011285056.1 DUF1273 domain-containing protein -
  DP15_RS02120 (DP15_432) recU 430181..430789 (+) 609 WP_002983622.1 Holliday junction resolvase RecU Machinery gene
  DP15_RS02125 (DP15_433) pbp1a 430776..432941 (+) 2166 WP_023609908.1 penicillin-binding protein PBP1A -
  DP15_RS02130 (DP15_435) prx 433185..433367 (-) 183 WP_011017399.1 hypothetical protein Regulator
  DP15_RS02135 (DP15_436) speA 433587..434342 (+) 756 WP_009880239.1 streptococcal pyrogenic exotoxin SpeA -
  DP15_RS02140 (DP15_437) - 434464..435681 (-) 1218 WP_023611377.1 peptidoglycan amidohydrolase family protein -
  DP15_RS02150 (DP15_439) - 435800..436027 (-) 228 WP_003058873.1 phage holin -
  DP15_RS02155 (DP15_440) - 436024..436296 (-) 273 WP_011017397.1 hypothetical protein -
  DP15_RS02160 (DP15_441) - 436308..436940 (-) 633 WP_023611372.1 hypothetical protein -
  DP15_RS02165 (DP15_442) - 436943..437371 (-) 429 WP_002988448.1 DUF1617 family protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6989.07 Da        Isoelectric Point: 4.3094

>NTDB_id=110929 DP15_RS02130 WP_011017399.1 433185..433367(-) (prx) [Streptococcus pyogenes strain ATCC 19615]
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPGEGVRPWEVLTEEKVEEVMRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=110929 DP15_RS02130 WP_011017399.1 433185..433367(-) (prx) [Streptococcus pyogenes strain ATCC 19615]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGTGACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCAGGAGAGGGAGTCAGGCCATGGGAGGTGTTGACAGAGGAAAAAGTGGAAGAAG
TGATGAGGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

71.667

100

0.717

  prx Streptococcus pyogenes MGAS8232

70

100

0.7

  prx Streptococcus pyogenes MGAS315

95.122

68.333

0.65

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517


Multiple sequence alignment