Detailed information NTG0109772

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ABXG87_RS01435
• Genome accession: NZ_AP031488
• Coordinates: 269363..270262 (+)
• Length: 299 a.a.
• NCBI ID: WP_045768781.1
• Uniprot ID: A0AAX1YC26
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 264363..275262

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS01415 (Ssa13956_02260)	trkA	265528..266877 (-)	1350	WP_013990035.1	Trk system potassium transporter TrkA	-
ABXG87_RS01420 (Ssa13956_02270)	-	267155..267664 (+)	510	WP_070578732.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
ABXG87_RS01425 (Ssa13956_02280)	-	267973..268530 (+)	558	WP_013990037.1	ECF transporter S component	-
ABXG87_RS01430 (Ssa13956_02290)	-	268533..269183 (+)	651	WP_353551696.1	phosphatase PAP2 family protein	-
ABXG87_RS01435 (Ssa13956_02300)	comR	269363..270262 (+)	900	WP_045768781.1	helix-turn-helix transcriptional regulator	Regulator
ABXG87_RS01440 (Ssa13956_02310)	comA	270437..272533 (+)	2097	WP_073686724.1	peptide cleavage/export ABC transporter	Regulator
ABXG87_RS01445 (Ssa13956_02320)	-	272643..272975 (+)	333	WP_013990041.1	DUF805 domain-containing protein	-
ABXG87_RS01450 (Ssa13956_02330)	-	273027..273743 (-)	717	WP_201710510.1	hypothetical protein	-
ABXG87_RS01455 (Ssa13956_02340)	-	274151..274666 (+)	516	WP_002886548.1	AmiS/UreI family transporter	-
ABXG87_RS01460 (Ssa13956_02350)	-	274691..274993 (+)	303	WP_002886558.1	urease subunit gamma	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35216.70 Da
• Isoelectric Point: 5.5610

>NTDB_id=109772 ABXG87_RS01435 WP_045768781.1 269363..270262(+) (comR) [Streptococcus salivarius strain NBRC 13956]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKNMADLLDHDNITIPDEYYE
MKNRLIKFPTYRNPERIKDKLALIEEVYEKFFELLPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKKKFST
NDLLVIDYYFFHLYGRKQYDKKLFEKIVKRVLNQEIWTDDVHNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKS
QFYSYKPSVFVLKAKYELLHKENKKKAAENYDKAIMFASVLEDSVLEESIKAGKAADGL

Nucleotide

• Length: 900 bp

>NTDB_id=109772 ABXG87_RS01435 WP_045768781.1 269363..270262(+) (comR) [Streptococcus salivarius strain NBRC 13956]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGTCAGCAGATGTCACGTGAAGTACTATGTTT
AGATGGTGCGGAGTTGACTGTTCGCCAGTTAATTCGCATTGAAAAAGGGGAATCTCTCCCGTCTTTAGATAGACTATCTT
ACATCGCAAAACGTCTAGGAAAAAATATGGCCGATCTATTGGATCATGACAATATTACTATCCCTGATGAATATTATGAG
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCAGAAAGAATAAAGGATAAACTTGCCTTAATTGAGGAAGT
CTATGAGAAATTCTTTGAACTTCTTCCAGAAGAAGAACTATTAACTCTAGATATTTTGGAAAATATATTAAGTTTCACTA
GTTGGGAGGAGAGTCCAAAGGTTGAGGAAATATATGAAGATTTATTTGAACAGGTCAAAAGGAAGAAGAAATTCTCAACT
AACGATTTATTAGTTATTGACTATTATTTCTTCCATCTTTATGGAAGAAAACAGTATGACAAAAAACTTTTTGAAAAAAT
CGTAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTCCATAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTGAAGATTTTTCACAATTCCTTTTCAGACTTCTTAACAGTTGTGGATAAAGCATTAGCCGTTATAGAAAAATCA
CAATTCTATAGCTATAAACCTAGTGTTTTTGTTCTCAAAGCTAAATATGAACTTCTGCATAAGGAAAATAAGAAAAAGGC
TGCAGAGAATTACGATAAGGCCATAATGTTTGCTTCCGTTTTAGAAGACTCGGTTTTAGAAGAAAGTATAAAAGCAGGGA
AAGCGGCAGATGGTTTATAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-292)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus salivarius strain HSISS4	96.99	100	0.97
comR	Streptococcus salivarius SK126	96.321	100	0.963
comR	Streptococcus thermophilus LMG 18311	94.649	100	0.946
comR	Streptococcus thermophilus LMD-9	93.98	100	0.94
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.475	100	0.425
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421