Detailed information NTG1097446

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ACM0O0_RS01530
• Genome accession: NZ_CP180689
• Coordinates: 315668..317794 (+)
• Length: 708 a.a.
• NCBI ID: WP_416040968.1
• Uniprot ID: -
• Organism: Acinetobacter lactucae isolate nanjing
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 310668..322794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM0O0_RS01510	pilM	312591..313649 (+)	1059	WP_016143662.1	pilus assembly protein PilM	Machinery gene
ACM0O0_RS01515	pilN	313649..314290 (+)	642	WP_416040966.1	PilN domain-containing protein	Machinery gene
ACM0O0_RS01520	pilO	314287..315066 (+)	780	WP_416040967.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACM0O0_RS01525	pilP	315078..315605 (+)	528	WP_125738852.1	pilus assembly protein PilP	Machinery gene
ACM0O0_RS01530	pilQ	315668..317794 (+)	2127	WP_416040968.1	type IV pilus secretin PilQ	Machinery gene
ACM0O0_RS01535	aroK	317806..318375 (+)	570	WP_002116987.1	shikimate kinase AroK	-
ACM0O0_RS01540	aroB	318404..319486 (+)	1083	WP_416040969.1	3-dehydroquinate synthase	-
ACM0O0_RS01545	-	319503..320384 (+)	882	WP_373358439.1	hypothetical protein	-

Sequence

Protein

• Length: 708 a.a.
• Molecular weight: 76772.18 Da
• Isoelectric Point: 5.9912

>NTDB_id=1097446 ACM0O0_RS01530 WP_416040968.1 315668..317794(+) (pilQ) [Acinetobacter lactucae isolate nanjing]
MNHVFSQFSMGAVAIAIMQVASAQVSMTNIVPTQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFDKAQQNLTQSKV
AIGTNEASSVDVSSDDQRSRLTVNLKEAGAFTTRIEGNTFILKINTAQAIAKPAQTSVMQPQGVSNIGFQRGGQGEGLIV
IDLLGSNTPVDVQQQGSKVVVKTLGSKIPAHLAKRLNVNDFATPVATIESYNEKGNGVITIQSTGSYEYMAYQAENKLTI
SLKRPQDKTVNPSSKPSNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVAELIKAEDDEAKALAQTIKLAPIQTDYIRLNYAKAADVLKLIEDTRDGKTAVANRTSNSDSLALES
LLSFRGSAVADTRTNTLIINDTAQNIDKVRKMIDLIDVQIKQVMVEARIVRASTSFTKELGVKWGILSQGITNNNNLLVG
GSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVTNPAGSIAFGLISMSDFMLDLELSALQADGYGEVISTPKVMTA
DKQSARVATGQQVPYQTTTNSAAGATASTSFKDALLSLDVTPSITPDGKIQMKLDISKDSVAGEAPNGELILNKNNINTN
VLVNNGETVILGGVFEQTTSNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLVRNH

Nucleotide

• Length: 2127 bp

>NTDB_id=1097446 ACM0O0_RS01530 WP_416040968.1 315668..317794(+) (pilQ) [Acinetobacter lactucae isolate nanjing]
ATGAATCACGTATTCAGTCAGTTTTCTATGGGGGCTGTAGCGATTGCAATTATGCAGGTTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCGACACAAATAGCGGGTCAGGGTACGGAAATTCGAGTGATGTTTAATGGTTTGCCGCCGCAACCAC
AGGCATATCAACTTGAAAATCCTTCACGTTTGATTTTAGATTTTGATAAAGCGCAGCAGAATCTCACACAGTCAAAAGTA
GCGATTGGAACGAATGAGGCGAGCTCTGTCGATGTGAGCTCTGATGATCAGCGTTCACGTTTGACTGTCAATTTAAAAGA
AGCAGGTGCTTTTACTACTCGTATTGAAGGCAATACTTTTATTTTAAAAATTAATACAGCTCAAGCTATAGCGAAGCCCG
CACAAACAAGTGTGATGCAACCCCAAGGTGTTTCAAATATTGGCTTTCAGCGCGGTGGTCAAGGAGAAGGCCTTATTGTT
ATCGATTTGCTAGGTAGTAATACCCCTGTTGATGTGCAGCAACAAGGTAGTAAAGTTGTAGTAAAAACATTAGGTTCTAA
AATTCCCGCGCATTTAGCTAAACGCTTAAATGTTAATGATTTTGCTACGCCTGTTGCGACAATTGAATCTTATAACGAAA
AAGGCAATGGTGTTATTACGATCCAATCCACTGGTAGCTATGAATATATGGCTTATCAGGCGGAAAATAAATTAACCATT
AGCCTAAAGCGTCCTCAAGATAAAACTGTAAACCCTTCATCTAAGCCATCTAATTATTCTGGGAATAAACTTTCTCTTGA
TTTCCAAGATATTGAAGTTCGACGCGTTTTACAATTATTGGCAGATTTTACTGGCATTAATATGGTTGCGGCTGACAGTG
TGCAAGGGAACATCACTTTACGTTTAAAAGACGTTCCATGGGACCAAGCACTTGATATTATTTTAAAAACTAAAAATTTA
GATAAACGTAGAAATGGTAACGTTATTTGGATTGCTCCAGTCGCTGAGTTAATCAAAGCAGAAGATGATGAAGCAAAAGC
TTTAGCACAAACTATTAAATTAGCACCGATCCAAACGGATTATATTCGTTTGAACTATGCAAAAGCAGCAGATGTGCTGA
AGCTAATTGAAGATACCCGGGATGGTAAGACTGCTGTCGCAAACCGTACCTCAAATTCAGACTCTCTTGCTTTAGAAAGT
TTATTGAGCTTCCGAGGTAGTGCTGTTGCTGATACGCGTACCAACACTTTGATTATAAATGATACTGCCCAGAACATTGA
TAAAGTTCGTAAAATGATTGATTTGATTGATGTGCAGATCAAACAAGTCATGGTTGAAGCTCGTATTGTAAGAGCCTCTA
CTTCTTTTACGAAAGAACTCGGCGTTAAATGGGGCATATTATCGCAAGGGATTACTAACAATAATAATTTGTTAGTTGGT
GGGAGTGAAACGACCTTGTGGAATCTAAGAGAACCTAAAAAAGATGAAACCACAGGTGGTTACAAATACACGATTGAACG
CCCAGATAATTTAAATGTCGATTTAGGGGTAACTAATCCAGCTGGAAGTATTGCCTTTGGCTTGATCAGTATGTCGGATT
TTATGCTTGATCTTGAACTTTCTGCCCTACAAGCTGATGGCTATGGTGAGGTAATTTCCACACCTAAAGTGATGACCGCA
GATAAACAATCTGCCAGAGTGGCGACAGGTCAACAAGTCCCTTATCAAACCACAACGAATTCTGCTGCTGGCGCTACAGC
AAGTACTTCTTTTAAAGATGCGCTTTTAAGCCTGGACGTTACTCCGAGCATTACCCCTGACGGTAAAATTCAAATGAAAT
TGGATATTTCAAAGGATTCTGTTGCTGGTGAAGCACCTAATGGTGAGTTAATTTTAAATAAAAATAATATCAATACCAAT
GTACTGGTCAATAATGGTGAAACTGTTATTTTAGGAGGGGTATTTGAGCAGACGACTTCTAACTCACAAACCAAGGTTCC
TTTCTTTGGAGACATTCCTGTAGTTGGGCGTTTATTTAGAAAAGATGTGAAATCTGATGATAAGCAAGAGTTATTGATTT
TCGTTACGCCACGAATTGTTAATGACACTTTGGTGAGAAATCATTAA

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (361-442)

• Bacterial type II and III secretion system protein (Secretin) (542-700)

• AMIN domain (AMIN) (39-118)

• Secretin and TonB N terminus short domain (STN) (291-333)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	84.466	100	0.86
pilQ	Acinetobacter baumannii strain A118	84.327	100	0.859
comQ	Acinetobacter baylyi ADP1	73.464	100	0.743
pilQ	Pseudomonas aeruginosa PAK	38.942	100	0.405