Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ACM0O0_RS01515 | Genome accession | NZ_CP180689 |
| Coordinates | 313649..314290 (+) | Length | 213 a.a. |
| NCBI ID | WP_416040966.1 | Uniprot ID | - |
| Organism | Acinetobacter lactucae isolate nanjing | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 308649..319290
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM0O0_RS01495 | - | 308693..309025 (+) | 333 | WP_016143665.1 | hypothetical protein | - |
| ACM0O0_RS01500 | - | 309028..309852 (+) | 825 | WP_416040964.1 | putative RNA methyltransferase | - |
| ACM0O0_RS01505 | ponA | 309868..312429 (-) | 2562 | WP_416040965.1 | penicillin-binding protein PBP1a | - |
| ACM0O0_RS01510 | pilM | 312591..313649 (+) | 1059 | WP_016143662.1 | pilus assembly protein PilM | Machinery gene |
| ACM0O0_RS01515 | pilN | 313649..314290 (+) | 642 | WP_416040966.1 | PilN domain-containing protein | Machinery gene |
| ACM0O0_RS01520 | pilO | 314287..315066 (+) | 780 | WP_416040967.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACM0O0_RS01525 | pilP | 315078..315605 (+) | 528 | WP_125738852.1 | pilus assembly protein PilP | Machinery gene |
| ACM0O0_RS01530 | pilQ | 315668..317794 (+) | 2127 | WP_416040968.1 | type IV pilus secretin PilQ | Machinery gene |
| ACM0O0_RS01535 | aroK | 317806..318375 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23965.41 Da Isoelectric Point: 5.4186
>NTDB_id=1097443 ACM0O0_RS01515 WP_416040966.1 313649..314290(+) (pilN) [Acinetobacter lactucae isolate nanjing]
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFSGWFYLNQKLSDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
TEEKKDKAVSSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEIAK
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFSGWFYLNQKLSDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
TEEKKDKAVSSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEIAK
Nucleotide
Download Length: 642 bp
>NTDB_id=1097443 ACM0O0_RS01515 WP_416040966.1 313649..314290(+) (pilN) [Acinetobacter lactucae isolate nanjing]
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTCGGGAGCAGCGCAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTTCTGGGTGGTTTTATTTGAATCAAAAACTCAGTGATCAAGAACAAGCGA
ATCAACTCATTATCAGTACAAACCAGAATCTAGATCAACAGCTTAAAACCTTAAATGGCTTGCAAGAACAGCGTGACGCA
ATTATTGAGCGTATGAAGCTCATCCAAGGATTACAAAGTCAGCGTCCAGTCGTTGTACGTTTGGTGGATGAATTGGTACG
CGTGACTCCAGCAGCCATGTATTTGACTAAATTCAGCCGAACTGGAGATAAATTTACCATTGAAGGTAAAGCGGAAAGTC
CAAATACAGTTGCAGAGTTATTACGTAATCTCGAAGCATCACCATGGTATCGCAACGCTTTTATGAATTCTTTCTTAGCG
ACTGAAGAGAAAAAAGATAAGGCTGTAAGTTCTTTGCTTCCTCGAGTAGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGAGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGATAGCAAAAT
GA
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTCGGGAGCAGCGCAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTTCTGGGTGGTTTTATTTGAATCAAAAACTCAGTGATCAAGAACAAGCGA
ATCAACTCATTATCAGTACAAACCAGAATCTAGATCAACAGCTTAAAACCTTAAATGGCTTGCAAGAACAGCGTGACGCA
ATTATTGAGCGTATGAAGCTCATCCAAGGATTACAAAGTCAGCGTCCAGTCGTTGTACGTTTGGTGGATGAATTGGTACG
CGTGACTCCAGCAGCCATGTATTTGACTAAATTCAGCCGAACTGGAGATAAATTTACCATTGAAGGTAAAGCGGAAAGTC
CAAATACAGTTGCAGAGTTATTACGTAATCTCGAAGCATCACCATGGTATCGCAACGCTTTTATGAATTCTTTCTTAGCG
ACTGAAGAGAAAAAAGATAAGGCTGTAAGTTCTTTGCTTCCTCGAGTAGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGAGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGATAGCAAAAT
GA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
89.202 |
100 |
0.892 |
| comN | Acinetobacter baylyi ADP1 |
71.569 |
95.775 |
0.685 |