Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ACMUEV_RS02530 | Genome accession | NZ_CP180258 |
| Coordinates | 546601..546966 (+) | Length | 121 a.a. |
| NCBI ID | WP_017290869.1 | Uniprot ID | A0AA97ASN3 |
| Organism | Leptolyngbya sp. FACHB-1624 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 541601..551966
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMUEV_RS02510 (ACMUEV_02510) | - | 541850..542068 (-) | 219 | WP_026148973.1 | DUF433 domain-containing protein | - |
| ACMUEV_RS02515 (ACMUEV_02515) | tilS | 542226..543197 (+) | 972 | WP_190648446.1 | tRNA lysidine(34) synthetase TilS | - |
| ACMUEV_RS02520 (ACMUEV_02520) | hmpF | 543314..545095 (-) | 1782 | WP_190648442.1 | pilus motility taxis protein HmpF | - |
| ACMUEV_RS02525 (ACMUEV_02525) | - | 545240..546472 (+) | 1233 | WP_190648439.1 | response regulator | - |
| ACMUEV_RS02530 (ACMUEV_02530) | pilH | 546601..546966 (+) | 366 | WP_017290869.1 | response regulator transcription factor | Machinery gene |
| ACMUEV_RS02535 (ACMUEV_02535) | - | 546978..547508 (+) | 531 | WP_017290868.1 | chemotaxis protein CheW | - |
| ACMUEV_RS02540 (ACMUEV_02540) | pilJ | 547764..550403 (+) | 2640 | WP_017290866.1 | methyl-accepting chemotaxis protein | Machinery gene |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13408.58 Da Isoelectric Point: 5.1869
>NTDB_id=1094875 ACMUEV_RS02530 WP_017290869.1 546601..546966(+) (pilH) [Leptolyngbya sp. FACHB-1624]
MSTVLVVEDSVTQREMITDLLKGSGIEVTIATDGVEALEHIQGHCPDLVVLDIVMPRMNGYEVCRRLKADPKTQKVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
MSTVLVVEDSVTQREMITDLLKGSGIEVTIATDGVEALEHIQGHCPDLVVLDIVMPRMNGYEVCRRLKADPKTQKVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=1094875 ACMUEV_RS02530 WP_017290869.1 546601..546966(+) (pilH) [Leptolyngbya sp. FACHB-1624]
ATGAGTACAGTTTTAGTCGTGGAAGATAGTGTCACCCAAAGAGAGATGATCACTGATCTGCTTAAGGGAAGTGGCATTGA
GGTGACGATCGCGACCGATGGCGTTGAAGCCTTGGAACACATTCAAGGGCATTGTCCTGATCTTGTGGTTTTGGATATTG
TCATGCCTCGAATGAATGGCTATGAGGTTTGCCGTCGGCTCAAAGCCGATCCCAAAACTCAGAAAGTGCCAGTCGTGATG
TGTTCGTCCAAAGGAGAAGAGTTCGATCGCTATTGGGGCATGAAGCAGGGGGCGGATGCCTATATTGCTAAGCCCTTTCA
GCCCACTGAACTCGTCGGTACAGTCAAACAATTGTTGCGCGGTTAG
ATGAGTACAGTTTTAGTCGTGGAAGATAGTGTCACCCAAAGAGAGATGATCACTGATCTGCTTAAGGGAAGTGGCATTGA
GGTGACGATCGCGACCGATGGCGTTGAAGCCTTGGAACACATTCAAGGGCATTGTCCTGATCTTGTGGTTTTGGATATTG
TCATGCCTCGAATGAATGGCTATGAGGTTTGCCGTCGGCTCAAAGCCGATCCCAAAACTCAGAAAGTGCCAGTCGTGATG
TGTTCGTCCAAAGGAGAAGAGTTCGATCGCTATTGGGGCATGAAGCAGGGGGCGGATGCCTATATTGCTAAGCCCTTTCA
GCCCACTGAACTCGTCGGTACAGTCAAACAATTGTTGCGCGGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
76.86 |
100 |
0.769 |
| pilG | Acinetobacter baumannii strain A118 |
42.105 |
94.215 |
0.397 |
| micA | Streptococcus pneumoniae Cp1015 |
39.167 |
99.174 |
0.388 |
| vicR | Streptococcus mutans UA159 |
37.5 |
99.174 |
0.372 |
| pilL-C | Synechocystis sp. PCC 6803 |
37.5 |
99.174 |
0.372 |
| chpA | Acinetobacter baumannii strain A118 |
38.793 |
95.868 |
0.372 |