Detailed information NTG1092873

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACK25W_RS15510
• Genome accession: NZ_CP179722
• Coordinates: 3022808..3023404 (+)
• Length: 198 a.a.
• NCBI ID: WP_034660066.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain FJAT-56819
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3017808..3028404

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK25W_RS15490 (ACK25W_15490)	nikA	3018125..3019756 (-)	1632	WP_106036497.1	nickel ABC transporter substrate-binding protein	-
ACK25W_RS15495 (ACK25W_15495)	-	3019879..3021048 (-)	1170	WP_106036496.1	macrolide family glycosyltransferase	-
ACK25W_RS15500 (ACK25W_15500)	-	3021217..3022107 (-)	891	WP_414051879.1	ABC transporter substrate-binding protein	-
ACK25W_RS15510 (ACK25W_15510)	clpP	3022808..3023404 (+)	597	WP_034660066.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACK25W_RS15515 (ACK25W_15515)	-	3023464..3024042 (-)	579	WP_034660067.1	TIGR00730 family Rossman fold protein	-
ACK25W_RS15520 (ACK25W_15520)	-	3024179..3024520 (+)	342	WP_034660068.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
ACK25W_RS15525 (ACK25W_15525)	-	3024549..3026171 (-)	1623	WP_060597350.1	SulP family inorganic anion transporter	-
ACK25W_RS15530 (ACK25W_15530)	-	3026209..3026790 (-)	582	WP_060597724.1	beta-class carbonic anhydrase	-
ACK25W_RS15535 (ACK25W_15535)	-	3027344..3028321 (+)	978	WP_414051664.1	2-hydroxyacid dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.99 Da
• Isoelectric Point: 4.6141

>NTDB_id=1092873 ACK25W_RS15510 WP_034660066.1 3022808..3023404(+) (clpP) [Bacillus pumilus strain FJAT-56819]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALEYGLIDKVLTRNSEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=1092873 ACK25W_RS15510 WP_034660066.1 3022808..3023404(+) (clpP) [Bacillus pumilus strain FJAT-56819]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACCATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTGATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTGAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.893	99.495	0.924
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.063	96.465	0.657
clpP	Streptococcus thermophilus LMG 18311	59.067	97.475	0.576
clpP	Streptococcus thermophilus LMD-9	59.067	97.475	0.576
clpP	Lactococcus lactis subsp. cremoris KW2	57.216	97.98	0.561
clpP	Streptococcus pneumoniae D39	56.701	97.98	0.556
clpP	Streptococcus pneumoniae Rx1	56.701	97.98	0.556
clpP	Streptococcus pneumoniae R6	56.701	97.98	0.556
clpP	Streptococcus pneumoniae TIGR4	56.701	97.98	0.556
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.155	97.98	0.54
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535