Detailed information NTG1092420

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACL9SD_RS19560
• Genome accession: NZ_CP178914
• Coordinates: 3871045..3871617 (-)
• Length: 190 a.a.
• NCBI ID: WP_080131521.1
• Uniprot ID: -
• Organism: Bacillus paralicheniformis strain IFST-745
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3866045..3876617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL9SD_RS19540 (ACL9SD_19540)	-	3867104..3868402 (+)	1299	WP_041817345.1	hemolysin family protein	-
ACL9SD_RS19545 (ACL9SD_19545)	-	3868551..3869577 (+)	1027	Protein_3802	ammonium transporter	-
ACL9SD_RS19550 (ACL9SD_19550)	-	3869596..3869946 (+)	351	WP_003185936.1	P-II family nitrogen regulator	-
ACL9SD_RS19555 (ACL9SD_19555)	-	3870170..3870553 (+)	384	WP_020453222.1	hypothetical protein	-
ACL9SD_RS19560 (ACL9SD_19560)	clpP	3871045..3871617 (-)	573	WP_080131521.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACL9SD_RS19565 (ACL9SD_19565)	-	3871631..3872236 (-)	606	WP_020453224.1	RNA polymerase sigma factor	-
ACL9SD_RS19570 (ACL9SD_19570)	-	3872372..3873247 (-)	876	WP_020453225.1	M23 family metallopeptidase	-
ACL9SD_RS19575 (ACL9SD_19575)	-	3873441..3873938 (+)	498	WP_020453226.1	GNAT family N-acetyltransferase	-
ACL9SD_RS19580 (ACL9SD_19580)	-	3873989..3874432 (-)	444	WP_020453227.1	YwnF family protein	-
ACL9SD_RS19585 (ACL9SD_19585)	cls	3874680..3876128 (+)	1449	WP_025810656.1	cardiolipin synthase	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21051.12 Da
• Isoelectric Point: 4.9212

>NTDB_id=1092420 ACL9SD_RS19560 WP_080131521.1 3871045..3871617(-) (clpP) [Bacillus paralicheniformis strain IFST-745]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDISIYINSPGGSTSAGYAILDT
MDYVNPDVRTICVGMAASMGAILLAGGTKGKRYALKNSEIMIHQPLGGVKGQATDMEISAKRIIKLREKIEHFFNERTGQ
PIERLKADMERDYFMDADEAKAYGVIDAVL

Nucleotide

• Length: 573 bp

>NTDB_id=1092420 ACL9SD_RS19560 WP_080131521.1 3871045..3871617(-) (clpP) [Bacillus paralicheniformis strain IFST-745]
ATGAACACCATACCTTACGTCATTGAGAAAACGGCTGCCGGTGAAAGATCGTACGATATTTTTTCCAGACTTTTAAAAGA
CCGGATCATTATGATCGGCTCTGAATTCAACGATGACCTCGCCAATCGGGTCACCGCCCAGTTGCTGTTTTTGTCAGCCG
AAGACAATGAAAAAGACATTTCGATCTATATCAACAGCCCGGGCGGATCAACTTCCGCGGGATATGCGATTTTGGATACG
ATGGACTATGTGAACCCGGATGTCCGCACGATCTGCGTCGGAATGGCAGCTTCCATGGGAGCGATTCTCCTCGCCGGCGG
AACAAAAGGCAAACGGTATGCGCTCAAAAACAGCGAAATCATGATCCATCAGCCGCTCGGCGGCGTCAAAGGACAGGCGA
CAGACATGGAGATTTCAGCGAAGCGGATCATCAAACTGAGGGAAAAAATCGAGCACTTTTTTAACGAACGAACGGGCCAG
CCCATTGAAAGACTAAAAGCCGACATGGAACGCGATTACTTTATGGATGCGGACGAAGCGAAGGCATACGGTGTGATTGA
CGCTGTTTTGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	64.737	100	0.647
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.963	98.421	0.6
clpP	Streptococcus thermophilus LMG 18311	55.026	99.474	0.547
clpP	Streptococcus thermophilus LMD-9	55.026	99.474	0.547
clpP	Streptococcus pyogenes MGAS315	54.497	99.474	0.542
clpP	Streptococcus pyogenes JRS4	54.497	99.474	0.542
clpP	Streptococcus pneumoniae D39	53.968	99.474	0.537
clpP	Streptococcus mutans UA159	53.968	99.474	0.537
clpP	Streptococcus pneumoniae Rx1	53.968	99.474	0.537
clpP	Streptococcus pneumoniae R6	53.968	99.474	0.537
clpP	Streptococcus pneumoniae TIGR4	53.968	99.474	0.537
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	99.474	0.521
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	51.323	99.474	0.511