Detailed information NTG1090794

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACL6EQ_RS16960
• Genome accession: NZ_CP178716
• Coordinates: 3271437..3272030 (+)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain SY1483
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3266437..3277030

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL6EQ_RS16925 (ACL6EQ_16925)	-	3267431..3268015 (+)	585	WP_202411884.1	TetR family transcriptional regulator	-
ACL6EQ_RS16930 (ACL6EQ_16930)	psmA	3268097..3268432 (+)	336	WP_086344353.1	SMR family transporter	-
ACL6EQ_RS16935 (ACL6EQ_16935)	psmB	3268432..3268752 (+)	321	WP_003228222.1	QacE family quaternary ammonium compound efflux SMR transporter	-
ACL6EQ_RS16940 (ACL6EQ_16940)	yvdQ	3268788..3269300 (-)	513	WP_014478056.1	DUF3231 family protein	-
ACL6EQ_RS16945 (ACL6EQ_16945)	-	3269448..3269582 (-)	135	Protein_3301	poly-gamma-glutamate hydrolase family protein	-
ACL6EQ_RS16950 (ACL6EQ_16950)	cotR	3269772..3270734 (+)	963	WP_212129147.1	patatin-like phospholipase family protein	-
ACL6EQ_RS16960 (ACL6EQ_16960)	clpP	3271437..3272030 (+)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACL6EQ_RS16965 (ACL6EQ_16965)	pgmB	3272092..3272766 (-)	675	WP_413359071.1	beta-phosphoglucomutase	-
ACL6EQ_RS16970 (ACL6EQ_16970)	malL	3272763..3274448 (-)	1686	WP_413359074.1	oligo-1,6-glucosidase	-
ACL6EQ_RS16975 (ACL6EQ_16975)	mdxK	3274441..3276714 (-)	2274	WP_413361098.1	maltose phosphorylase	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=1090794 ACL6EQ_RS16960 WP_003228214.1 3271437..3272030(+) (clpP) [Bacillus subtilis strain SY1483]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=1090794 ACL6EQ_RS16960 WP_003228214.1 3271437..3272030(+) (clpP) [Bacillus subtilis strain SY1483]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGATAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538