Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   GT95_RS05270 Genome accession   NZ_CP008813
Coordinates   995020..995208 (+) Length   62 a.a.
NCBI ID   WP_069107257.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain C001     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 990020..1000208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GT95_RS05245 (GT95_05080) - 990264..992267 (+) 2004 WP_069107261.1 DUF859 family phage minor structural protein -
  GT95_RS05250 (GT95_05085) - 992279..992671 (+) 393 WP_000883861.1 DUF1366 domain-containing protein -
  GT95_RS11315 (GT95_05090) - 992694..992822 (+) 129 WP_000973384.1 hypothetical protein -
  GT95_RS05255 (GT95_05095) - 992831..993133 (+) 303 WP_069107260.1 hypothetical protein -
  GT95_RS05260 (GT95_05100) - 993126..993350 (+) 225 WP_069107259.1 phage holin -
  GT95_RS05265 (GT95_05105) - 993480..994823 (+) 1344 WP_069107258.1 GH25 family lysozyme -
  GT95_RS05270 (GT95_05110) prx 995020..995208 (+) 189 WP_069107257.1 Paratox Regulator
  GT95_RS05280 (GT95_05115) - 995802..996413 (+) 612 WP_001056394.1 TVP38/TMEM64 family protein -
  GT95_RS05285 (GT95_05120) - 996450..997232 (-) 783 WP_000467141.1 hypothetical protein -
  GT95_RS05290 (GT95_05125) - 997244..997942 (-) 699 WP_000192683.1 ABC transporter ATP-binding protein -
  GT95_RS05295 (GT95_05130) - 997943..998311 (-) 369 WP_000312256.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7332.27 Da        Isoelectric Point: 4.1541

>NTDB_id=108918 GT95_RS05270 WP_069107257.1 995020..995208(+) (prx) [Streptococcus agalactiae strain C001]
MLTYDEFKQAIDNGYIVGDAVTIVRKNGQIFDYVLHGEEVRPWEILTDERVEDVLRELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=108918 GT95_RS05270 WP_069107257.1 995020..995208(+) (prx) [Streptococcus agalactiae strain C001]
ATGCTAACATACGATGAGTTTAAACAAGCAATTGATAACGGATATATCGTAGGAGACGCAGTCACGATTGTGCGAAAAAA
CGGACAGATTTTTGATTATGTGTTACATGGTGAGGAAGTGAGACCGTGGGAGATTTTGACTGATGAGAGAGTAGAAGACG
TGTTGAGGGAATTAGACTATATTAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

75.806

100

0.758
  prx Streptococcus pyogenes MGAS315

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS8232

71.186

95.161

0.677
  prx Streptococcus pyogenes MGAS315

71.186

95.161

0.677
  prx Streptococcus pyogenes MGAS315

71.186

95.161

0.677
  prx Streptococcus pyogenes MGAS315

90.476

67.742

0.613
  prx Streptococcus pyogenes MGAS315

73.171

66.129

0.484

Multiple sequence alignment