Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACJWMD_RS11000 Genome accession   NZ_CP177182
Coordinates   2308085..2308267 (-) Length   60 a.a.
NCBI ID   WP_002887316.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD6060     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2303085..2313267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMD_RS10970 - 2303218..2303616 (-) 399 WP_002887311.1 hypothetical protein -
  ACJWMD_RS10975 - 2303652..2304749 (-) 1098 WP_139053039.1 hypothetical protein -
  ACJWMD_RS10980 - 2305464..2305646 (-) 183 WP_002887313.1 hypothetical protein -
  ACJWMD_RS10985 - 2305661..2306326 (-) 666 WP_002887314.1 hypothetical protein -
  ACJWMD_RS10990 - 2306416..2306799 (-) 384 WP_411888493.1 hypothetical protein -
  ACJWMD_RS10995 - 2306700..2307923 (-) 1224 WP_411888494.1 hypothetical protein -
  ACJWMD_RS11000 prx 2308085..2308267 (-) 183 WP_002887316.1 hypothetical protein Regulator
  ACJWMD_RS11005 - 2308846..2309286 (-) 441 WP_002887318.1 ASCH domain-containing protein -
  ACJWMD_RS11010 - 2309283..2309780 (-) 498 WP_002887319.1 NUDIX hydrolase -
  ACJWMD_RS11015 - 2310269..2311105 (-) 837 WP_002887320.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  ACJWMD_RS11020 - 2311105..2311695 (-) 591 WP_002887321.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  ACJWMD_RS11025 - 2312028..2312627 (-) 600 WP_411888495.1 hypothetical protein -
  ACJWMD_RS11030 - 2312652..2313008 (-) 357 WP_002887325.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6932.87 Da        Isoelectric Point: 4.1831

>NTDB_id=1086048 ACJWMD_RS11000 WP_002887316.1 2308085..2308267(-) (prx) [Streptococcus salivarius strain MRD6060]
MITYDEVMEAIERGFIKGDKISIVRRNGKIHDYVLPGEKIEPGEIVTEEDVETVLEELRE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1086048 ACJWMD_RS11000 WP_002887316.1 2308085..2308267(-) (prx) [Streptococcus salivarius strain MRD6060]
ATGATAACATATGATGAAGTAATGGAAGCGATAGAAAGAGGGTTTATCAAGGGCGATAAAATCAGCATTGTCCGACGAAA
TGGGAAGATTCATGATTATGTCTTGCCAGGAGAGAAAATAGAACCTGGAGAAATAGTGACAGAAGAGGACGTAGAAACTG
TACTTGAAGAGTTGAGGGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

63.793

96.667

0.617
  prx Streptococcus pyogenes MGAS8232

58.621

96.667

0.567
  prx Streptococcus pyogenes MGAS315

56.897

96.667

0.55
  prx Streptococcus pyogenes MGAS315

53.448

96.667

0.517
  prx Streptococcus pyogenes MGAS315

61.905

70

0.433
  prx Streptococcus pyogenes MGAS315

55.814

71.667

0.4
  prx Streptococcus pyogenes MGAS315

60

66.667

0.4

Multiple sequence alignment