Detailed information NTG1085850

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ACJVG6_RS01410
• Genome accession: NZ_CP177180
• Coordinates: 262099..262998 (+)
• Length: 299 a.a.
• NCBI ID: WP_002886544.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain MRD-KRBY
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 257099..267998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJVG6_RS01390	trkA	258263..259612 (-)	1350	WP_002886536.1	Trk system potassium transporter TrkA	-
ACJVG6_RS01395	-	259890..260399 (+)	510	WP_002886541.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
ACJVG6_RS01400	-	260710..261267 (+)	558	WP_002886542.1	ECF transporter S component	-
ACJVG6_RS01405	-	261270..261920 (+)	651	WP_002886543.1	phosphatase PAP2 family protein	-
ACJVG6_RS01410	comR	262099..262998 (+)	900	WP_002886544.1	helix-turn-helix transcriptional regulator	Regulator
ACJVG6_RS01415	comA	263173..265269 (+)	2097	WP_002886545.1	peptide cleavage/export ABC transporter	Regulator
ACJVG6_RS01420	-	265380..265712 (+)	333	WP_002886546.1	DUF805 domain-containing protein	-
ACJVG6_RS01425	-	265764..266183 (-)	420	WP_224119000.1	hypothetical protein	-
ACJVG6_RS01430	-	266571..267086 (+)	516	WP_002886548.1	AmiS/UreI family transporter	-
ACJVG6_RS01435	-	267111..267413 (+)	303	WP_002886558.1	urease subunit gamma	-
ACJVG6_RS01440	-	267425..267736 (+)	312	WP_002886559.1	urease subunit beta	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35213.69 Da
• Isoelectric Point: 5.3732

>NTDB_id=1085850 ACJVG6_RS01410 WP_002886544.1 262099..262998(+) (comR) [Streptococcus salivarius strain MRD-KRBY]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDKLSYIAKRLGKNMTDLLDHDNITIPDEYYE
MKNRLIKFPTYRNPERIKAKLALIEEVYEKFFELLPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFST
NDLLVIDYYFFHLYGRKQYDKKLFERIVKRVLNQEIWTDDVYNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKS
QFYSYKPSVFVLKAKYELLHKGNKKEAAENYDKAIMFASVLEDSVLEESIKAGKVADGL

Nucleotide

• Length: 900 bp

>NTDB_id=1085850 ACJVG6_RS01410 WP_002886544.1 262099..262998(+) (comR) [Streptococcus salivarius strain MRD-KRBY]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGCCAGCAGATGTCACGTGAAGTGCTATGTTT
AGATGGTGCGGAATTGACTGTTCGTCAGTTAATTCGCATTGAAAAAGGGGAGTCGCTCCCGTCTTTGGATAAATTATCTT
ATATTGCAAAACGTCTAGGAAAAAATATGACCGATTTATTGGATCATGATAATATTACTATCCCTGACGAATACTACGAG
ATGAAGAATCGTCTGATTAAGTTTCCAACGTATAGAAATCCAGAAAGAATAAAGGCTAAACTTGCCTTAATTGAGGAGGT
CTATGAGAAATTCTTTGAACTTCTCCCAGAAGAAGAATTGTTAACTCTAGATATTTTGGAAAATATTTTGAGTTTTACTA
GTTGGGAAGAGAGTCCTAAAGTTGAGGAGATATATGAAGACTTGTTTGAACAAGTCAAAAGGAAGAGGAAATTCTCAACT
AACGATTTATTAGTTATTGACTACTATTTCTTCCATCTTTATGGAAGAAAACAGTATGACAAAAAACTTTTTGAAAGAAT
CGTAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGACGTCTATAATATTGTTTTGTTTAATGATTTGATGGCTATCG
CTGCTTTGAAGATTTTTCACAATTCCTTCTCAGACTTCTTAACAGTTGTGGATAAAGCCTTAGCTGTTATAGAAAAATCA
CAATTCTATAGCTATAAACCTAGTGTTTTTGTTCTCAAAGCCAAATATGAACTTCTTCATAAAGGAAACAAGAAAGAGGC
TGCAGAAAATTACGATAAGGCTATAATGTTTGCTTCCGTTTTAGAAGACTCGGTACTAGAAGAAAGTATAAAGGCAGGTA
AAGTGGCAGATGGTTTATAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-292)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus salivarius strain HSISS4	99.331	100	0.993
comR	Streptococcus salivarius SK126	97.993	100	0.98
comR	Streptococcus thermophilus LMG 18311	95.652	100	0.957
comR	Streptococcus thermophilus LMD-9	94.983	100	0.95
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	42.475	100	0.425
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421