Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ACLIMH_RS25145 | Genome accession | NZ_CP177046 |
| Coordinates | 4818820..4819401 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus thuringiensis strain MPB12 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4813820..4824401
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLIMH_RS25110 (ACLIMH_25110) | - | 4814815..4815021 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| ACLIMH_RS25115 (ACLIMH_25115) | - | 4815115..4815600 (+) | 486 | WP_001228539.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| ACLIMH_RS25120 (ACLIMH_25120) | spoVAC | 4815630..4816106 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| ACLIMH_RS25125 (ACLIMH_25125) | spoVAD | 4816107..4817123 (+) | 1017 | WP_000938965.1 | stage V sporulation protein AD | - |
| ACLIMH_RS25130 (ACLIMH_25130) | spoVAE | 4817120..4817470 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| ACLIMH_RS25135 (ACLIMH_25135) | - | 4817482..4817688 (+) | 207 | WP_000215915.1 | DUF1657 domain-containing protein | - |
| ACLIMH_RS25140 (ACLIMH_25140) | - | 4817709..4818578 (+) | 870 | WP_000018931.1 | DUF421 domain-containing protein | - |
| ACLIMH_RS25145 (ACLIMH_25145) | clpP | 4818820..4819401 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ACLIMH_RS25150 (ACLIMH_25150) | - | 4819726..4819974 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| ACLIMH_RS25155 (ACLIMH_25155) | whiA | 4819998..4820948 (-) | 951 | WP_000006561.1 | DNA-binding protein WhiA | - |
| ACLIMH_RS25160 (ACLIMH_25160) | - | 4821038..4821991 (-) | 954 | WP_000712177.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK | - |
| ACLIMH_RS25165 (ACLIMH_25165) | rapZ | 4821995..4822876 (-) | 882 | WP_000138464.1 | RNase adapter RapZ | - |
| ACLIMH_RS25170 (ACLIMH_25170) | - | 4822897..4823355 (-) | 459 | WP_001190080.1 | NUDIX hydrolase | - |
| ACLIMH_RS25175 (ACLIMH_25175) | - | 4823584..4824390 (-) | 807 | WP_000455203.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=1085282 ACLIMH_RS25145 WP_001049162.1 4818820..4819401(+) (clpP) [Bacillus thuringiensis strain MPB12]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=1085282 ACLIMH_RS25145 WP_001049162.1 4818820..4819401(+) (clpP) [Bacillus thuringiensis strain MPB12]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGGGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGGGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |