Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ACLIMC_RS25395 | Genome accession | NZ_CP177035 |
| Coordinates | 4866743..4867324 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus thuringiensis strain MPB08 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4861743..4872324
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLIMC_RS25360 (ACLIMC_25360) | - | 4862736..4862942 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| ACLIMC_RS25365 (ACLIMC_25365) | - | 4863036..4863521 (+) | 486 | WP_001228539.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| ACLIMC_RS25370 (ACLIMC_25370) | spoVAC | 4863552..4864028 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| ACLIMC_RS25375 (ACLIMC_25375) | spoVAD | 4864029..4865045 (+) | 1017 | WP_000938967.1 | stage V sporulation protein AD | - |
| ACLIMC_RS25380 (ACLIMC_25380) | spoVAE | 4865042..4865392 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| ACLIMC_RS25385 (ACLIMC_25385) | - | 4865404..4865610 (+) | 207 | WP_000215915.1 | DUF1657 domain-containing protein | - |
| ACLIMC_RS25390 (ACLIMC_25390) | - | 4865631..4866500 (+) | 870 | WP_000018934.1 | DUF421 domain-containing protein | - |
| ACLIMC_RS25395 (ACLIMC_25395) | clpP | 4866743..4867324 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ACLIMC_RS25400 (ACLIMC_25400) | - | 4867649..4867897 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| ACLIMC_RS25405 (ACLIMC_25405) | whiA | 4867921..4868871 (-) | 951 | WP_000006561.1 | DNA-binding protein WhiA | - |
| ACLIMC_RS25410 (ACLIMC_25410) | - | 4868961..4869914 (-) | 954 | WP_134188516.1 | uridine diphosphate-N-acetylglucosamine-binding protein YvcK | - |
| ACLIMC_RS25415 (ACLIMC_25415) | rapZ | 4869918..4870799 (-) | 882 | WP_000138464.1 | RNase adapter RapZ | - |
| ACLIMC_RS25420 (ACLIMC_25420) | - | 4870820..4871278 (-) | 459 | WP_001190080.1 | NUDIX hydrolase | - |
| ACLIMC_RS25425 (ACLIMC_25425) | - | 4871507..4872313 (-) | 807 | WP_000455202.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=1085010 ACLIMC_RS25395 WP_001049162.1 4866743..4867324(+) (clpP) [Bacillus thuringiensis strain MPB08]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=1085010 ACLIMC_RS25395 WP_001049162.1 4866743..4867324(+) (clpP) [Bacillus thuringiensis strain MPB08]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGGGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCTGAAAAAGATATTCATATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATTTACGATACA
ATGCAGTTTATTAAACCGCAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGGGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCTAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACAGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |