Detailed information NTG1080699

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACKW6F_RS16170
• Genome accession: NZ_CP176527
• Coordinates: 3151307..3151903 (+)
• Length: 198 a.a.
• NCBI ID: WP_024427684.1
• Uniprot ID: -
• Organism: Bacillus safensis strain D-62
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3146307..3156903

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKW6F_RS16135 (ACKW6F_16135)	-	3146559..3147449 (-)	891	WP_041115917.1	ABC transporter substrate-binding protein	-
ACKW6F_RS16140 (ACKW6F_16140)	-	3147856..3148254 (-)	399	WP_254965553.1	hypothetical protein	-
ACKW6F_RS16145 (ACKW6F_16145)	-	3148241..3148573 (-)	333	WP_100324754.1	hypothetical protein	-
ACKW6F_RS16150 (ACKW6F_16150)	-	3148570..3149175 (-)	606	WP_409482386.1	hypothetical protein	-
ACKW6F_RS16155 (ACKW6F_16155)	-	3149204..3149797 (-)	594	WP_254965548.1	hypothetical protein	-
ACKW6F_RS16160 (ACKW6F_16160)	-	3150197..3150334 (-)	138	WP_327822635.1	hypothetical protein	-
ACKW6F_RS16170 (ACKW6F_16170)	clpP	3151307..3151903 (+)	597	WP_024427684.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACKW6F_RS16175 (ACKW6F_16175)	-	3151964..3152542 (-)	579	WP_122631956.1	TIGR00730 family Rossman fold protein	-
ACKW6F_RS16180 (ACKW6F_16180)	-	3152680..3153021 (+)	342	WP_208946348.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
ACKW6F_RS16185 (ACKW6F_16185)	-	3153048..3154670 (-)	1623	WP_254965407.1	SulP family inorganic anion transporter	-
ACKW6F_RS16190 (ACKW6F_16190)	-	3154708..3155289 (-)	582	WP_024423545.1	beta-class carbonic anhydrase	-
ACKW6F_RS16195 (ACKW6F_16195)	-	3155843..3156820 (+)	978	WP_149126251.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6835

>NTDB_id=1080699 ACKW6F_RS16170 WP_024427684.1 3151307..3151903(+) (clpP) [Bacillus safensis strain D-62]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK

Nucleotide

• Length: 597 bp

>NTDB_id=1080699 ACKW6F_RS16170 WP_024427684.1 3151307..3151903(+) (clpP) [Bacillus safensis strain D-62]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGTTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGCATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
AGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.939	100	0.939
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53