Detailed information NTG1080069

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACKWPP_RS08145
• Genome accession: NZ_CP176418
• Coordinates: 1600479..1601069 (-)
• Length: 196 a.a.
• NCBI ID: WP_002937303.1
• Uniprot ID: A0A0K2E545
• Organism: Streptococcus suis strain KKAHC02
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1595479..1606069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWPP_RS08125 (ACKWPP_08125)	-	1596267..1597154 (-)	888	WP_004298925.1	branched-chain amino acid ABC transporter permease	-
ACKWPP_RS08130 (ACKWPP_08130)	-	1597485..1598741 (+)	1257	WP_409374378.1	ISL3 family transposase	-
ACKWPP_RS08135 (ACKWPP_08135)	-	1598779..1599948 (-)	1170	WP_024386220.1	ABC transporter substrate-binding protein	-
ACKWPP_RS08140 (ACKWPP_08140)	-	1600080..1600352 (-)	273	WP_024381609.1	YlbG family protein	-
ACKWPP_RS08145 (ACKWPP_08145)	clpP	1600479..1601069 (-)	591	WP_002937303.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACKWPP_RS08150 (ACKWPP_08150)	upp	1601186..1601815 (-)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
ACKWPP_RS08155 (ACKWPP_08155)	-	1601895..1603511 (-)	1617	WP_044680065.1	alpha-glucosidase	-
ACKWPP_RS08160 (ACKWPP_08160)	gtfA	1603584..1605032 (-)	1449	WP_409373788.1	sucrose phosphorylase	-
ACKWPP_RS08165 (ACKWPP_08165)	-	1605102..1605932 (-)	831	WP_002937312.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21494.74 Da
• Isoelectric Point: 5.7110

>NTDB_id=1080069 ACKWPP_RS08145 WP_002937303.1 1600479..1601069(-) (clpP) [Streptococcus suis strain KKAHC02]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGK
TVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 591 bp

>NTDB_id=1080069 ACKWPP_RS08145 WP_002937303.1 1600479..1601069(-) (clpP) [Streptococcus suis strain KKAHC02]
ATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGTTCTTATGATATTTACTCACGCCTTTTGAAAGACCGCAT
TATCATGTTGACAGGACCAGTTGAGGACAACATGGCAAACTCTATCATTGCCCAGTTGCTTTTCCTTGATGCCCAAGACC
CTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTTGCTATTGTAGATACTATGAAT
TTTATCAAGGCTGATGTGCAAACCATTGTTATGGGAACAGCGGCCAGTATGGGTACAATTATCGCTTCAAGCGGTGCCAA
AGGCAAACGTTTCATGTTGCCAAATGCGGAATACATGATTCACCAACCAATGGGTGGAACAGGTGGCGGTACACAGCAAA
CAGATATGGCTATTGCAGCAGAACACCTATTAAAAACACGTAATAAGCTAGAAAAAATCTTGGCAGACAACTCAGGTAAG
ACAGTCAAGCAAATCCACAAGGATGCGGAACGCGATTACTGGATGTCAGCTGAAGAAACCTTGGCTTACGGATTTATTGA
CCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

3D structure

• AlphaFold DB: A0A0K2E545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.347	100	0.923
clpP	Streptococcus pyogenes MGAS315	92.347	100	0.923
clpP	Streptococcus mutans UA159	90.306	100	0.903
clpP	Streptococcus pneumoniae R6	88.776	100	0.888
clpP	Streptococcus pneumoniae Rx1	88.776	100	0.888
clpP	Streptococcus pneumoniae D39	88.776	100	0.888
clpP	Streptococcus pneumoniae TIGR4	88.776	100	0.888
clpP	Streptococcus thermophilus LMG 18311	88.776	100	0.888
clpP	Streptococcus thermophilus LMD-9	88.776	100	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.184	100	0.842
clpP	Lactococcus lactis subsp. cremoris KW2	83.673	100	0.837
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	100	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.549	98.469	0.577