Detailed information NTG1079991

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACKWCM_RS16290
• Genome accession: NZ_CP176416
• Coordinates: 3174262..3174858 (+)
• Length: 198 a.a.
• NCBI ID: WP_024427684.1
• Uniprot ID: -
• Organism: Bacillus safensis strain GUCCb3-7
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3169262..3179858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWCM_RS16255 (ACKWCM_16255)	-	3169571..3170728 (-)	1158	WP_149126258.1	toll/interleukin-1 receptor domain-containing protein	-
ACKWCM_RS16260 (ACKWCM_16260)	-	3171014..3171202 (-)	189	WP_149126257.1	hypothetical protein	-
ACKWCM_RS16265 (ACKWCM_16265)	-	3171425..3171874 (-)	450	WP_187470512.1	protein-export chaperone SecB	-
ACKWCM_RS16270 (ACKWCM_16270)	-	3171871..3172188 (-)	318	WP_149126255.1	hypothetical protein	-
ACKWCM_RS16275 (ACKWCM_16275)	-	3172218..3172814 (-)	597	WP_149126254.1	hypothetical protein	-
ACKWCM_RS16280 (ACKWCM_16280)	-	3173149..3173286 (-)	138	WP_187470511.1	hypothetical protein	-
ACKWCM_RS16290 (ACKWCM_16290)	clpP	3174262..3174858 (+)	597	WP_024427684.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACKWCM_RS16295 (ACKWCM_16295)	-	3174919..3175497 (-)	579	WP_149126253.1	TIGR00730 family Rossman fold protein	-
ACKWCM_RS16300 (ACKWCM_16300)	-	3175635..3175976 (+)	342	WP_149126252.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
ACKWCM_RS16305 (ACKWCM_16305)	-	3176003..3177625 (-)	1623	WP_024423544.1	SulP family inorganic anion transporter	-
ACKWCM_RS16310 (ACKWCM_16310)	-	3177663..3178244 (-)	582	WP_025094003.1	carbonic anhydrase	-
ACKWCM_RS16315 (ACKWCM_16315)	-	3178798..3179775 (+)	978	WP_024423546.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6835

>NTDB_id=1079991 ACKWCM_RS16290 WP_024427684.1 3174262..3174858(+) (clpP) [Bacillus safensis strain GUCCb3-7]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEDQK

Nucleotide

• Length: 597 bp

>NTDB_id=1079991 ACKWCM_RS16290 WP_024427684.1 3174262..3174858(+) (clpP) [Bacillus safensis strain GUCCb3-7]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGTTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGCATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
AGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTCGGTGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGACCAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.939	100	0.939
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53