Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACJ23C_RS05465 | Genome accession | NZ_CP175646 |
| Coordinates | 1016503..1016964 (+) | Length | 153 a.a. |
| NCBI ID | WP_000993718.1 | Uniprot ID | A0A9P2XM63 |
| Organism | Acinetobacter baumannii strain HUMC1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1011503..1021964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ23C_RS05445 (ACJ23C_05440) | - | 1012893..1013780 (+) | 888 | WP_001017330.1 | metal-dependent hydrolase | - |
| ACJ23C_RS05450 (ACJ23C_05445) | - | 1013911..1014501 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| ACJ23C_RS05455 (ACJ23C_05450) | - | 1014523..1015605 (+) | 1083 | WP_001246381.1 | YgcG family protein | - |
| ACJ23C_RS05460 (ACJ23C_05455) | - | 1015599..1016159 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| ACJ23C_RS05465 (ACJ23C_05460) | pilA | 1016503..1016964 (+) | 462 | WP_000993718.1 | pilin | Machinery gene |
| ACJ23C_RS05470 (ACJ23C_05465) | - | 1017206..1018834 (+) | 1629 | WP_001195771.1 | PglL family O-oligosaccharyltransferase | - |
| ACJ23C_RS05475 (ACJ23C_05470) | bfr | 1018875..1019339 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| ACJ23C_RS05480 (ACJ23C_05475) | - | 1019584..1019778 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| ACJ23C_RS05485 (ACJ23C_05480) | - | 1019988..1020371 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 15449.52 Da Isoelectric Point: 4.9218
>NTDB_id=1078396 ACJ23C_RS05465 WP_000993718.1 1016503..1016964(+) (pilA) [Acinetobacter baumannii strain HUMC1]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYVARSQATAGYSEISNMRTGYDTELNDGTAITSLSQVGFTATSSGACS
AIGVTNFGNDGAATNAITCTLKGNPKIAGKIISLSRSATGAWTCSTDIATTDEFLPKGCTGGGTPAVGAITTL
Nucleotide
Download Length: 462 bp
>NTDB_id=1078396 ACJ23C_RS05465 WP_000993718.1 1016503..1016964(+) (pilA) [Acinetobacter baumannii strain HUMC1]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCTGCGATTGCGAT
TCCTGCTTATCAAAATTATGTAGCTCGTTCTCAGGCTACAGCTGGATATTCTGAAATTAGTAACATGCGTACGGGTTACG
ACACCGAATTAAATGATGGTACAGCGATTACCTCTCTTTCTCAAGTTGGCTTTACTGCGACTTCATCTGGCGCATGTTCA
GCCATAGGTGTTACAAATTTTGGTAACGATGGCGCAGCTACTAACGCTATTACGTGTACTTTAAAAGGAAATCCAAAAAT
CGCTGGAAAGATTATTTCACTTTCACGTTCAGCGACCGGTGCATGGACTTGTAGTACAGATATTGCCACTACTGACGAAT
TCTTACCAAAAGGATGTACGGGTGGTGGAACACCAGCCGTTGGTGCAATTACTACTTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
64.286 |
100 |
0.647 |
| pilA | Pseudomonas aeruginosa PAK |
43.709 |
98.693 |
0.431 |
| pilA | Vibrio cholerae strain A1552 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae C6706 |
42.581 |
100 |
0.431 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
42.581 |
100 |
0.431 |
| comP | Acinetobacter baylyi ADP1 |
39.744 |
100 |
0.405 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
43.357 |
93.464 |
0.405 |