Detailed information NTG1076967

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACIU4M_RS06695
• Genome accession: NZ_CP174375
• Coordinates: 1218339..1218935 (+)
• Length: 198 a.a.
• NCBI ID: WP_024719872.1
• Uniprot ID: A0A2G8ISB7
• Organism: Bacillus altitudinis strain SF5
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1213339..1223935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIU4M_RS06675 (ACIU4M_06675)	-	1214770..1215936 (-)	1167	WP_160757986.1	macrolide family glycosyltransferase	-
ACIU4M_RS06680 (ACIU4M_06680)	-	1216104..1216994 (-)	891	WP_407708814.1	ABC transporter substrate-binding protein	-
ACIU4M_RS06685 (ACIU4M_06685)	-	1217246..1217710 (-)	465	WP_327854963.1	DinB family protein	-
ACIU4M_RS06695 (ACIU4M_06695)	clpP	1218339..1218935 (+)	597	WP_024719872.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ACIU4M_RS06700 (ACIU4M_06700)	-	1218991..1219569 (-)	579	WP_024719873.1	TIGR00730 family Rossman fold protein	-
ACIU4M_RS06705 (ACIU4M_06705)	-	1219706..1220047 (+)	342	WP_024719874.1	MazG nucleotide pyrophosphohydrolase domain-containing protein	-
ACIU4M_RS06710 (ACIU4M_06710)	-	1220077..1221699 (-)	1623	WP_173408319.1	SulP family inorganic anion transporter	-
ACIU4M_RS06715 (ACIU4M_06715)	-	1221737..1222318 (-)	582	WP_407708694.1	beta-class carbonic anhydrase	-
ACIU4M_RS06720 (ACIU4M_06720)	-	1222872..1223849 (+)	978	WP_041508114.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21832.00 Da
• Isoelectric Point: 4.6905

>NTDB_id=1076967 ACIU4M_RS06695 WP_024719872.1 1218339..1218935(+) (clpP) [Bacillus altitudinis strain SF5]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNSEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=1076967 ACIU4M_RS06695 WP_024719872.1 1218339..1218935(+) (clpP) [Bacillus altitudinis strain SF5]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTATCACAGCTTCTCTTCTTAGAAGCCG
AGGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCGATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCCCTTCCAAATAGTGAAGTGATGATTCACCAACCACTAGGTGGTGCGCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATTCAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A2G8ISB7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	92.929	100	0.929
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.701	97.98	0.556
clpP	Streptococcus pneumoniae Rx1	56.186	97.98	0.551
clpP	Streptococcus pneumoniae D39	56.186	97.98	0.551
clpP	Streptococcus pneumoniae R6	56.186	97.98	0.551
clpP	Streptococcus pneumoniae TIGR4	56.186	97.98	0.551
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.639	97.98	0.535