Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | ACJGJ0_RS08220 | Genome accession | NZ_CP174366 |
| Coordinates | 1921278..1921691 (-) | Length | 137 a.a. |
| NCBI ID | WP_005921365.1 | Uniprot ID | - |
| Organism | Xanthomonas citri pv. mangiferaeindicae strain GXBS06 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1916278..1926691
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJGJ0_RS08200 (ACJGJ0_08200) | pilR | 1917405..1918799 (+) | 1395 | WP_003488597.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ACJGJ0_RS08205 (ACJGJ0_08205) | - | 1918997..1919152 (-) | 156 | WP_003488595.1 | hypothetical protein | - |
| ACJGJ0_RS08210 (ACJGJ0_08210) | pilB | 1919284..1919403 (-) | 120 | WP_033482837.1 | hypothetical protein | Machinery gene |
| ACJGJ0_RS08215 (ACJGJ0_08215) | pilB | 1919500..1921236 (-) | 1737 | WP_033482835.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| ACJGJ0_RS08220 (ACJGJ0_08220) | pilA2 | 1921278..1921691 (-) | 414 | WP_005921365.1 | pilin | Machinery gene |
| ACJGJ0_RS08225 (ACJGJ0_08225) | comP | 1921788..1922216 (-) | 429 | WP_005921364.1 | pilin | Machinery gene |
| ACJGJ0_RS08230 (ACJGJ0_08230) | pilC | 1922561..1923820 (+) | 1260 | WP_033483308.1 | type II secretion system F family protein | Machinery gene |
| ACJGJ0_RS08235 (ACJGJ0_08235) | - | 1923827..1924690 (+) | 864 | WP_003491180.1 | A24 family peptidase | - |
| ACJGJ0_RS08240 (ACJGJ0_08240) | coaE | 1924704..1925312 (+) | 609 | WP_003491178.1 | dephospho-CoA kinase | - |
| ACJGJ0_RS08245 (ACJGJ0_08245) | - | 1925410..1926372 (+) | 963 | WP_103791079.1 | IS1595-like element IS1595 family transposase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14164.27 Da Isoelectric Point: 8.1169
>NTDB_id=1076886 ACJGJ0_RS08220 WP_005921365.1 1921278..1921691(-) (pilA2) [Xanthomonas citri pv. mangiferaeindicae strain GXBS06]
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVTEAIILADSAKAAVTQNVNNENALTTTACAGVSGLSSPTKN
VASFTCQGAGVLTVVTTNVAGSVTLSLVPSYNSDRPVIWTCRHVSGSASYVPSDCRN
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVTEAIILADSAKAAVTQNVNNENALTTTACAGVSGLSSPTKN
VASFTCQGAGVLTVVTTNVAGSVTLSLVPSYNSDRPVIWTCRHVSGSASYVPSDCRN
Nucleotide
Download Length: 414 bp
>NTDB_id=1076886 ACJGJ0_RS08220 WP_005921365.1 1921278..1921691(-) (pilA2) [Xanthomonas citri pv. mangiferaeindicae strain GXBS06]
ATGAGCCGGGTAAACGGTTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCATTGGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGACCGAAGCTATTATTTTGGCTGACTCTGCCAAAGCTGCGGTGA
CTCAGAATGTCAATAATGAAAATGCTTTGACAACTACTGCATGTGCGGGGGTGAGCGGGCTGTCGTCTCCCACTAAAAAT
GTAGCGTCTTTCACGTGCCAGGGCGCAGGAGTGCTGACTGTCGTTACGACCAACGTTGCAGGCTCGGTAACTCTGTCACT
TGTACCCAGCTACAACTCGGATCGTCCGGTAATCTGGACTTGCCGACATGTTTCTGGATCGGCTAGTTACGTGCCTTCAG
ATTGCCGAAATTGA
ATGAGCCGGGTAAACGGTTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCATTGGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGACCGAAGCTATTATTTTGGCTGACTCTGCCAAAGCTGCGGTGA
CTCAGAATGTCAATAATGAAAATGCTTTGACAACTACTGCATGTGCGGGGGTGAGCGGGCTGTCGTCTCCCACTAAAAAT
GTAGCGTCTTTCACGTGCCAGGGCGCAGGAGTGCTGACTGTCGTTACGACCAACGTTGCAGGCTCGGTAACTCTGTCACT
TGTACCCAGCTACAACTCGGATCGTCCGGTAATCTGGACTTGCCGACATGTTTCTGGATCGGCTAGTTACGTGCCTTCAG
ATTGCCGAAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
49.265 |
99.27 |
0.489 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
41.875 |
100 |
0.489 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.529 |
99.27 |
0.482 |
| comP | Acinetobacter baylyi ADP1 |
41.611 |
100 |
0.453 |