Detailed information NTG0107561

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AABJ90_RS03490
• Genome accession: NZ_AP028964
• Coordinates: 689042..689635 (-)
• Length: 197 a.a.
• NCBI ID: WP_003228214.1
• Uniprot ID: A0A199WEF2
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 684042..694635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS03475 (BsubNA05_06780)	mdxK	684358..686631 (+)	2274	WP_213414981.1	glycoside hydrolase family 65 protein	-
AABJ90_RS03480 (BsubNA05_06790)	malL	686624..688309 (+)	1686	WP_213414980.1	alpha-glucosidase	-
AABJ90_RS03485 (BsubNA05_06800)	pgmB	688306..688980 (+)	675	WP_338382476.1	beta-phosphoglucomutase	-
AABJ90_RS03490 (BsubNA05_06810)	clpP	689042..689635 (-)	594	WP_003228214.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AABJ90_RS03500 (BsubNA05_06820)	cotR	690263..691225 (-)	963	WP_029725962.1	sporulation hydrolase CotR	-
AABJ90_RS03505 (BsubNA05_06830)	cotNP	691581..692924 (+)	1344	WP_015251168.1	FAD-binding oxidoreductase	-
AABJ90_RS03510 (BsubNA05_06840)	yvdQ	693171..693683 (+)	513	WP_014478056.1	DUF3231 family protein	-
AABJ90_RS03515 (BsubNA05_06850)	psmB	693719..694039 (-)	321	WP_338382477.1	multidrug efflux SMR transporter	-
AABJ90_RS03520 (BsubNA05_06860)	psmA	694039..694374 (-)	336	WP_014480966.1	SMR family transporter	-

Sequence

Protein

• Length: 197 a.a.
• Molecular weight: 21682.00 Da
• Isoelectric Point: 4.9416

>NTDB_id=107561 AABJ90_RS03490 WP_003228214.1 689042..689635(-) (clpP) [Bacillus subtilis strain NA05 = NBRC 116153]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK

Nucleotide

• Length: 594 bp

>NTDB_id=107561 AABJ90_RS03490 WP_003228214.1 689042..689635(-) (clpP) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAGGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGATAAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

3D structure

• AlphaFold DB: A0A199WEF2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	100	100	1
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.617	95.431	0.655
clpP	Streptococcus thermophilus LMG 18311	58.163	99.492	0.579
clpP	Streptococcus thermophilus LMD-9	58.163	99.492	0.579
clpP	Streptococcus pneumoniae D39	57.812	97.462	0.563
clpP	Streptococcus pneumoniae Rx1	57.812	97.462	0.563
clpP	Streptococcus pneumoniae R6	57.812	97.462	0.563
clpP	Streptococcus pneumoniae TIGR4	57.812	97.462	0.563
clpP	Lactococcus lactis subsp. cremoris KW2	57.895	96.447	0.558
clpP	Streptococcus pyogenes JRS4	56.122	99.492	0.558
clpP	Streptococcus pyogenes MGAS315	56.122	99.492	0.558
clpP	Streptococcus mutans UA159	54.822	100	0.548
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.789	96.447	0.538