Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ACCH06_RS17380 | Genome accession | NZ_CP174157 |
| Coordinates | 3475955..3476551 (+) | Length | 198 a.a. |
| NCBI ID | WP_003326811.1 | Uniprot ID | A0AAP3CU21 |
| Organism | Bacillus atrophaeus strain SHZ-24 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3470955..3481551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCH06_RS17345 | aspP | 3471326..3472888 (+) | 1563 | WP_010790010.1 | aspartate/proton symporter AspP | - |
| ACCH06_RS17350 | - | 3472993..3473577 (+) | 585 | WP_003326817.1 | TetR family transcriptional regulator | - |
| ACCH06_RS17355 | - | 3473659..3473994 (+) | 336 | WP_010790011.1 | multidrug efflux SMR transporter | - |
| ACCH06_RS17360 | - | 3473994..3474308 (+) | 315 | WP_010790012.1 | multidrug efflux SMR transporter | - |
| ACCH06_RS17365 | speG | 3474334..3474861 (+) | 528 | WP_003326814.1 | spermidine N1-acetyltransferase | - |
| ACCH06_RS17370 | - | 3474947..3475432 (-) | 486 | WP_063638044.1 | DinB family protein | - |
| ACCH06_RS17380 | clpP | 3475955..3476551 (+) | 597 | WP_003326811.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ACCH06_RS17385 | - | 3476585..3477193 (-) | 609 | WP_061669208.1 | DJ-1/PfpI family protein | - |
| ACCH06_RS17390 | - | 3477278..3477853 (-) | 576 | WP_088118028.1 | TIGR00730 family Rossman fold protein | - |
| ACCH06_RS17395 | - | 3477968..3478288 (+) | 321 | WP_010790015.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| ACCH06_RS17400 | - | 3478316..3479926 (-) | 1611 | WP_258728193.1 | SulP family inorganic anion transporter | - |
| ACCH06_RS17405 | - | 3479945..3480529 (-) | 585 | WP_010790017.1 | carbonic anhydrase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21877.15 Da Isoelectric Point: 4.7114
>NTDB_id=1074705 ACCH06_RS17380 WP_003326811.1 3475955..3476551(+) (clpP) [Bacillus atrophaeus strain SHZ-24]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
Nucleotide
Download Length: 597 bp
>NTDB_id=1074705 ACCH06_RS17380 WP_003326811.1 3475955..3476551(+) (clpP) [Bacillus atrophaeus strain SHZ-24]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAGGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAGGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.455 |
100 |
0.955 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus thermophilus LMD-9 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus pneumoniae Rx1 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae D39 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae R6 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.701 |
97.98 |
0.556 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.124 |
97.98 |
0.53 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |