Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ACAM22_RS08225 Genome accession   NZ_AP028929
Coordinates   1791934..1793430 (-) Length   498 a.a.
NCBI ID   WP_000759914.1    Uniprot ID   I0SXD2
Organism   Streptococcus sp. SN-1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1786934..1798430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS08205 (MASAN616_15940) - 1787566..1788543 (-) 978 WP_000869838.1 ABC transporter substrate-binding protein -
  ACAM22_RS08210 (MASAN616_15950) amiF 1788995..1789921 (-) 927 WP_070842265.1 ATP-binding cassette domain-containing protein Regulator
  ACAM22_RS08215 (MASAN616_15960) amiE 1789932..1790999 (-) 1068 WP_000159550.1 ABC transporter ATP-binding protein Regulator
  ACAM22_RS08220 (MASAN616_15970) amiD 1791008..1791934 (-) 927 WP_000103691.1 oligopeptide ABC transporter permease OppC Regulator
  ACAM22_RS08225 (MASAN616_15980) amiC 1791934..1793430 (-) 1497 WP_000759914.1 ABC transporter permease Regulator
  ACAM22_RS08230 (MASAN616_15990) amiA3 1793497..1795485 (-) 1989 WP_369606672.1 peptide ABC transporter substrate-binding protein Regulator
  ACAM22_RS08240 (MASAN616_16000) - 1795914..1797245 (-) 1332 WP_369606673.1 hemolysin family protein -
  ACAM22_RS08245 (MASAN616_16010) endA 1797400..1798224 (-) 825 WP_153226562.1 DNA-entry nuclease EndA Machinery gene

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55670.13 Da        Isoelectric Point: 9.3386

>NTDB_id=107348 ACAM22_RS08225 WP_000759914.1 1791934..1793430(-) (amiC) [Streptococcus sp. SN-1]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTADKRDNYENTVYERMGYIEYYDTKELQEKAS
QMDASVTVEANDTNKAIYEKYIKQIGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNINLGDSYPTYANSPVLQVITQGQGQTKTSQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVANYGKDDPYTATESNYQYPSMIASSAVVGLIGLVISYAIAVPLGSAMARFKNTWIDSFSTGA
LTFLMALPTIALVYIVRLAGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=107348 ACAM22_RS08225 WP_000759914.1 1791934..1793430(-) (amiC) [Streptococcus sp. SN-1]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCTATCTTCTTAGTAACAACCTTGACTTACACGATTAT
CTATACAATGGTTCCTCGAAAATTGATTTTCAAACAGGATACCAACTATAACAAGATTGCGACAACGGCTGATAAACGTG
ATAACTATGAAAATACAGTTTATGAGCGTATGGGCTATATCGAGTACTACGATACCAAAGAGTTGCAAGAAAAAGCTAGC
CAGATGGATGCTTCTGTAACAGTTGAAGCTAATGACACCAACAAGGCTATCTATGAAAAATACATCAAACAAATCGGTCA
TGGTTGGACCTTGGGAGAATTTACTGAAAGTGGCCAATTCTACGCTACTCGTGAAATCCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGATCATACAAATAAAATTCAAGACCCTGAAAATCCAGACTTGAAACGTTACCTT
CGTTTTGAAAATGATCCAGCTATCGGATGGTCCTTGGTTGGTTCAGGAACTAAACACAAATATCTCTTGTACTTCAACAG
TCAGTTCCCATTTGTGCATCAAAACTTTGTGAACATTAATTTAGGTGACTCTTATCCAACCTATGCTAATAGTCCTGTTT
TACAGGTTATTACTCAAGGACAAGGGCAAACAAAAACATCTCAAGTTCAGTTCCCAACAGGTAAGAAGACTTCTTCTGTA
AATATTTACTCAAGAACCTATAAATCACCTAGTCAGGCTGATTCTCGTGAAGTAGCCAACTACGGAAAAGATGACCCATA
TACTGCAACTGAAAGCAACTACCAATATCCTTCTATGATTGCCAGCTCTGCTGTCGTTGGATTGATCGGTTTGGTGATTT
CTTATGCGATTGCTGTGCCACTTGGTTCAGCTATGGCTCGCTTCAAGAACACTTGGATTGATAGCTTCTCAACAGGGGCT
TTGACCTTCTTGATGGCTCTTCCAACAATTGCCTTGGTTTATATCGTTCGTTTGGCTGGTTCTTCAATCGGCTTGCCAGA
TTCATTCCCTATCTTGGGTGCTGGAGATTGGCGTTCGTATGTTTTACCAGCAGTTATCCTTGGTTTGTTGGGTGCTCCTG
GTACAGCCATTTGGATTCGTCGTTATATGATTGACTTACAATCACAAGACTTTGTACGTTTTGCTCGTGCCAAAGGTTTG
TCTGAAAAAGAAATTTCAAATAAACACATCTTTAAAAATGCTATGGTTCCGCTTGTTTCAGGAATTCCTGGTGCTGTTAT
CGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTAGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACTTCTTTTGGGAGAT
ATTTGGATGACGATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SXD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.506

100

0.765
  amiC Streptococcus thermophilus LMG 18311

76.305

100

0.763
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment