Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ACAM22_RS08215 Genome accession   NZ_AP028929
Coordinates   1789932..1790999 (-) Length   355 a.a.
NCBI ID   WP_000159550.1    Uniprot ID   F9HAA0
Organism   Streptococcus sp. SN-1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1784932..1795999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS08195 (MASAN616_15920) - 1785845..1786648 (-) 804 WP_369606671.1 ABC transporter ATP-binding protein -
  ACAM22_RS08200 (MASAN616_15930) - 1786661..1787554 (-) 894 WP_125422242.1 ABC transporter permease -
  ACAM22_RS08205 (MASAN616_15940) - 1787566..1788543 (-) 978 WP_000869838.1 ABC transporter substrate-binding protein -
  ACAM22_RS08210 (MASAN616_15950) amiF 1788995..1789921 (-) 927 WP_070842265.1 ATP-binding cassette domain-containing protein Regulator
  ACAM22_RS08215 (MASAN616_15960) amiE 1789932..1790999 (-) 1068 WP_000159550.1 ABC transporter ATP-binding protein Regulator
  ACAM22_RS08220 (MASAN616_15970) amiD 1791008..1791934 (-) 927 WP_000103691.1 oligopeptide ABC transporter permease OppC Regulator
  ACAM22_RS08225 (MASAN616_15980) amiC 1791934..1793430 (-) 1497 WP_000759914.1 ABC transporter permease Regulator
  ACAM22_RS08230 (MASAN616_15990) amiA3 1793497..1795485 (-) 1989 WP_369606672.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39491.07 Da        Isoelectric Point: 4.8078

>NTDB_id=107346 ACAM22_RS08215 WP_000159550.1 1789932..1790999(-) (amiE) [Streptococcus sp. SN-1]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFDEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLAD

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=107346 ACAM22_RS08215 WP_000159550.1 1789932..1790999(-) (amiE) [Streptococcus sp. SN-1]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTGACAGC
CATTCGCGGCGTTTCCCTTGAACTAGTTGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGAAAATCTGTTT
TGACAAAGACTTTCACAGGTATGCTTGAAGAAAATGGTCGTATTGCTCAAGGAAGTATTGACTACCGTGGTCAGGATTTG
ACAGCTTTATCTTCTCACAAAGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACGATCTTCCAAGACCCGATGACTAG
TTTGGACCCAATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCAA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGGATTCCAGATGCAGATAGACGTTTTGATGAATACCCCTTCCAATAT
TCTGGAGGAATGCGTCAACGTATCGTTATTGCTATTGCCCTTGCCTGCCGACCTGATGTCTTGATTTGTGACGAGCCAAC
GACTGCCTTGGATGTAACCATCCAAGCACAGATTATTGATTTGCTAAAATCTTTACAAAACGAGTACCATTTCACAACAA
TCTTTATCACCCATGACCTTGGTGTGGTAGCAAGTATTGCGGATAAGGTAGCAGTGATGTATGCAGGAGAAATCGTTGAG
TATGGAACTGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCTTTTGCCT
TGCGTTCTGACTATGCAATGCAGATTGACTTCGAACAAAAAGCCCCTCAATTCTCAGTATCAGAGACGCATTGGGCTAAA
ACTTGGCTTCTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCACGATAAGATCCGTGAAAA
AATGGGATTTGCCCATCTGGCAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAA0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

87.887

100

0.879

  amiE Streptococcus thermophilus LMG 18311

86.197

100

0.862

  amiE Streptococcus thermophilus LMD-9

86.197

100

0.862

  oppD Streptococcus mutans UA159

54.261

99.155

0.538


Multiple sequence alignment