Detailed information NTG1070775

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ACIVIR_RS00825
• Genome accession: NZ_CP173225
• Coordinates: 133836..134297 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250544.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 262
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 128836..139297

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIVIR_RS00790	-	129140..129964 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
ACIVIR_RS00795	rnpA	129939..130310 (-)	372	WP_000739246.1	ribonuclease P protein component	-
ACIVIR_RS00800	-	130327..130458 (-)	132	WP_000768904.1	hypothetical protein	-
ACIVIR_RS00805	-	130459..131649 (-)	1191	WP_000167766.1	acetate kinase	-
ACIVIR_RS00810	comYH	131700..132653 (-)	954	WP_050308921.1	class I SAM-dependent methyltransferase	Machinery gene
ACIVIR_RS00815	-	132714..133308 (-)	595	Protein_133	class I SAM-dependent methyltransferase	-
ACIVIR_RS00820	comGG/cglG	133445..133858 (-)	414	WP_050102600.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACIVIR_RS00825	comGF/cglF	133836..134297 (-)	462	WP_000250544.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACIVIR_RS00830	comGE/cglE	134260..134562 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACIVIR_RS00835	comGD/cglD	134525..134929 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACIVIR_RS00840	comGC/cglC	134922..135248 (-)	327	WP_000738632.1	comG operon protein ComGC	Machinery gene
ACIVIR_RS00845	comGB/cglB	135250..136266 (-)	1017	WP_114880773.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACIVIR_RS00850	comGA/cglA/cilD	136214..137155 (-)	942	WP_000249549.1	competence type IV pilus ATPase ComGA	Machinery gene
ACIVIR_RS00855	-	137231..137596 (-)	366	WP_000286415.1	DUF1033 family protein	-
ACIVIR_RS00860	-	137747..138805 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17821.32 Da
• Isoelectric Point: 6.4832

>NTDB_id=1070775 ACIVIR_RS00825 WP_000250544.1 133836..134297(-) (comGF/cglF) [Streptococcus pneumoniae strain 262]
MVQNSCWQSKSHKVKAFTLLESLLALLVISGGLLLFQAMSQLLISEVRYQQQSEQKEWILFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=1070775 ACIVIR_RS00825 WP_000250544.1 133836..134297(-) (comGF/cglF) [Streptococcus pneumoniae strain 262]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTGCT
TGTCATCAGTGGGGGCTTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGATTTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae D39	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae R6	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae TIGR4	93.464	100	0.935
comGF/cglF	Streptococcus mitis SK321	92.157	100	0.922
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909