Detailed information
Overview
| Name | comGG/cglG | Type | Machinery gene |
| Locus tag | ACIVIR_RS00820 | Genome accession | NZ_CP173225 |
| Coordinates | 133445..133858 (-) | Length | 137 a.a. |
| NCBI ID | WP_050102600.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain 262 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 128445..138858
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIVIR_RS00790 | - | 129140..129964 (-) | 825 | WP_000727904.1 | membrane protein insertase YidC | - |
| ACIVIR_RS00795 | rnpA | 129939..130310 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| ACIVIR_RS00800 | - | 130327..130458 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| ACIVIR_RS00805 | - | 130459..131649 (-) | 1191 | WP_000167766.1 | acetate kinase | - |
| ACIVIR_RS00810 | comYH | 131700..132653 (-) | 954 | WP_050308921.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACIVIR_RS00815 | - | 132714..133308 (-) | 595 | Protein_133 | class I SAM-dependent methyltransferase | - |
| ACIVIR_RS00820 | comGG/cglG | 133445..133858 (-) | 414 | WP_050102600.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACIVIR_RS00825 | comGF/cglF | 133836..134297 (-) | 462 | WP_000250544.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACIVIR_RS00830 | comGE/cglE | 134260..134562 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACIVIR_RS00835 | comGD/cglD | 134525..134929 (-) | 405 | WP_000588020.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACIVIR_RS00840 | comGC/cglC | 134922..135248 (-) | 327 | WP_000738632.1 | comG operon protein ComGC | Machinery gene |
| ACIVIR_RS00845 | comGB/cglB | 135250..136266 (-) | 1017 | WP_114880773.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACIVIR_RS00850 | comGA/cglA/cilD | 136214..137155 (-) | 942 | WP_000249549.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACIVIR_RS00855 | - | 137231..137596 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| ACIVIR_RS00860 | - | 137747..138805 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15920.34 Da Isoelectric Point: 10.1695
>NTDB_id=1070774 ACIVIR_RS00820 WP_050102600.1 133445..133858(-) (comGG/cglG) [Streptococcus pneumoniae strain 262]
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKK
TSLVTTVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKK
TSLVTTVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKVEKKKSEEKPEKKENS
Nucleotide
Download Length: 414 bp
>NTDB_id=1070774 ACIVIR_RS00820 WP_050102600.1 133445..133858(-) (comGG/cglG) [Streptococcus pneumoniae strain 262]
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTA
AACGAACCAAGGATAAAGCCGAGCAAGAAAGTGGGGAACAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTGGTGACGACTGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCTATCTTTAGTCTTTTGTTGCA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTGAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTA
AACGAACCAAGGATAAAGCCGAGCAAGAAAGTGGGGAACAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTGGTGACGACTGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAAAAAGTGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGA
AAGAGAATTCCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG/cglG | Streptococcus pneumoniae D39 |
96.35 |
100 |
0.964 |
| comGG/cglG | Streptococcus pneumoniae R6 |
96.35 |
100 |
0.964 |
| comGG/cglG | Streptococcus pneumoniae TIGR4 |
96.35 |
100 |
0.964 |
| comGG/cglG | Streptococcus pneumoniae Rx1 |
96.35 |
100 |
0.964 |
| comGG/cglG | Streptococcus mitis SK321 |
86.131 |
100 |
0.861 |
| comGG/cglG | Streptococcus mitis NCTC 12261 |
90.909 |
88.321 |
0.803 |
| comYG | Streptococcus mutans UA140 |
40.299 |
97.81 |
0.394 |
| comYG | Streptococcus mutans UA159 |
40.299 |
97.81 |
0.394 |