Detailed information NTG1070491

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACIQTD_RS02995
• Genome accession: NZ_CP173185
• Coordinates: 590561..591160 (-)
• Length: 199 a.a.
• NCBI ID: WP_003129593.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain MGEL24009
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 585561..596160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIQTD_RS02985	acnA	586690..589236 (+)	2547	WP_017864222.1	aconitate hydratase AcnA	-
ACIQTD_RS02990	icd	589257..590495 (+)	1239	WP_320719388.1	NADP-dependent isocitrate dehydrogenase	-
ACIQTD_RS02995	clpP	590561..591160 (-)	600	WP_003129593.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACIQTD_RS03000	-	591356..591886 (+)	531	WP_003129594.1	hypothetical protein	-
ACIQTD_RS03005	spx	592046..592444 (+)	399	WP_003129597.1	transcriptional regulator Spx	-
ACIQTD_RS03010	-	592826..593989 (-)	1164	WP_017864224.1	ABC transporter permease	-

Sequence

Protein

• Length: 199 a.a.
• Molecular weight: 22082.24 Da
• Isoelectric Point: 4.7423

>NTDB_id=1070491 ACIQTD_RS02995 WP_003129593.1 590561..591160(-) (clpP) [Lactococcus lactis subsp. lactis strain MGEL24009]
MGYLVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVD
TMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGQGTQQTDMAIVAEQLLKTRKRLEQILADN
SNRSLEQIHKDAERDHWMDAKETLEYGFIDEIMENNSLK

Nucleotide

• Length: 600 bp

>NTDB_id=1070491 ACIQTD_RS02995 WP_003129593.1 590561..591160(-) (clpP) [Lactococcus lactis subsp. lactis strain MGEL24009]
ATGGGTTATTTAGTACCTACCGTTATTGAACAATCAAGCCGTGGCGAACGTGCTTATGATATTTATTCACGACTTTTAAA
AGACCGCATTATCATGCTGACAGGACCTGTTGAAGATGGAATGGCAAATTCTATCATTGCTCAACTTCTTTTCTTGGATG
CACAAGATAACACTAAAGATATTTATCTCTACGTAAATACACCTGGTGGTTCTGTATCTGCTGGTCTTGCCATTGTTGAT
ACAATGAATTTTATCAAATCAGATGTTCAAACTATCGTTATGGGAATGGCTGCCTCTATGGGAACAATCATTGCTTCAAG
CGGAACAAAAGGCAAACGATTCATGTTGCCAAATGCTGAATATCTTATTCACCAACCAATGGGTGGTACAGGTCAAGGCA
CTCAACAAACTGATATGGCTATTGTTGCTGAGCAACTTTTGAAAACTCGTAAACGTTTGGAACAAATTCTTGCTGATAAT
TCCAACCGTTCACTTGAACAAATTCACAAAGATGCCGAACGTGACCATTGGATGGATGCCAAAGAAACTTTGGAATATGG
TTTCATCGATGAAATTATGGAAAATAATTCCTTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-195)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	100	100	1
clpP	Lactococcus lactis subsp. cremoris KW2	99.497	100	0.995
clpP	Streptococcus mutans UA159	87.755	98.492	0.864
clpP	Streptococcus thermophilus LMD-9	87.245	98.492	0.859
clpP	Streptococcus thermophilus LMG 18311	87.245	98.492	0.859
clpP	Streptococcus pyogenes MGAS315	86.224	98.492	0.849
clpP	Streptococcus pyogenes JRS4	86.224	98.492	0.849
clpP	Streptococcus pneumoniae D39	85.128	97.99	0.834
clpP	Streptococcus pneumoniae TIGR4	85.128	97.99	0.834
clpP	Streptococcus pneumoniae R6	85.128	97.99	0.834
clpP	Streptococcus pneumoniae Rx1	85.128	97.99	0.834
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.477	96.985	0.548
clpP	Bacillus subtilis subsp. subtilis str. 168	57.368	95.477	0.548