Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | AABJ45_RS02575 | Genome accession | NZ_AP028611 |
| Coordinates | 515884..516795 (-) | Length | 303 a.a. |
| NCBI ID | WP_001827226.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain Sep6 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 510884..521795
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ45_RS02545 (TKY121527_05050) | - | 511227..511556 (-) | 330 | WP_000132572.1 | hypothetical protein | - |
| AABJ45_RS02550 (TKY121527_05060) | - | 511833..512171 (+) | 339 | WP_000876675.1 | LytTR family DNA-binding domain-containing protein | - |
| AABJ45_RS02555 (TKY121527_05070) | comE/blpR | 512176..512913 (+) | 738 | WP_001219119.1 | LytTR family DNA-binding domain-containing protein | Regulator |
| AABJ45_RS02560 (TKY121527_05090) | - | 512927..514256 (+) | 1330 | Protein_503 | sensor histidine kinase | - |
| AABJ45_RS02565 (TKY121527_05100) | blpC | 514300..514455 (-) | 156 | WP_000358811.1 | quorum-sensing system pheromone BlpC | - |
| AABJ45_RS02570 (TKY121527_05110) | - | 514512..515873 (-) | 1362 | WP_001069103.1 | bacteriocin secretion accessory protein | - |
| AABJ45_RS02575 (TKY121527_05120) | comA/nlmT | 515884..516795 (-) | 912 | WP_001827226.1 | ATP-binding cassette domain-containing protein | Regulator |
| AABJ45_RS02580 (TKY121527_05130) | comA/nlmT | 516785..517510 (-) | 726 | WP_167750760.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| AABJ45_RS02585 (TKY121527_05140) | comA/nlmT | 517455..518042 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| AABJ45_RS02590 (TKY121527_05150) | - | 518324..518527 (+) | 204 | WP_001093262.1 | bacteriocin class II family protein | - |
| AABJ45_RS02595 (TKY121527_05160) | - | 518845..519048 (+) | 204 | WP_000411016.1 | hypothetical protein | - |
| AABJ45_RS02600 | - | 520051..520855 (+) | 805 | Protein_511 | IS5 family transposase | - |
| AABJ45_RS02605 (TKY121527_05200) | blpM | 521005..521259 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| AABJ45_RS02610 (TKY121527_05210) | blpN | 521275..521478 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
Sequence
Protein
Download Length: 303 a.a. Molecular weight: 34051.15 Da Isoelectric Point: 7.2767
>NTDB_id=106571 AABJ45_RS02575 WP_001827226.1 515884..516795(-) (comA/nlmT) [Streptococcus pneumoniae strain Sep6]
MSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIFNGSI
LENLTLGGNHMISQEDILKACEVAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKSPVLILDEATSGLDVL
TEKKVIDNLMSLTNKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
MSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKVLRRHINYLPQQAYIFNGSI
LENLTLGGNHMISQEDILKACEVAEIRQDIERMPMGYQTQLSDGAGLSGGQKQRIALARALLTKSPVLILDEATSGLDVL
TEKKVIDNLMSLTNKTILFVAHRLSIAERTNRVIVLDQGKIIEVGSHQELMQAQGFYHHLFNK
Nucleotide
Download Length: 912 bp
>NTDB_id=106571 AABJ45_RS02575 WP_001827226.1 515884..516795(-) (comA/nlmT) [Streptococcus pneumoniae strain Sep6]
ATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATT
TTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGTCAAGAAGATATTCTAAAAGCTTGTGAAGTAGCTGAAATCCG
TCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAGAAGCAAC
GAATCGCTCTCGCTCGTGCTCTTTTAACTAAATCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTG
ACTGAGAAAAAGGTTATAGATAATCTTATGTCCCTAACTAATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGC
CGAACGAACTAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGC
AAGGATTCTACCATCATCTATTCAATAAATAA
ATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAGTCTTGCGCCGTCATATTAATTACCTACCCCAACAAGCCTATATCTTTAATGGCTCTATT
TTGGAAAACTTAACCTTGGGCGGTAATCATATGATTAGTCAAGAAGATATTCTAAAAGCTTGTGAAGTAGCTGAAATCCG
TCAAGACATTGAAAGAATGCCTATGGGCTATCAAACTCAGCTCTCTGATGGAGCTGGTCTATCAGGAGGACAGAAGCAAC
GAATCGCTCTCGCTCGTGCTCTTTTAACTAAATCTCCTGTTTTAATACTAGATGAAGCTACTAGCGGTCTTGATGTCTTG
ACTGAGAAAAAGGTTATAGATAATCTTATGTCCCTAACTAATAAAACCATTCTCTTTGTAGCCCATCGTCTCAGTATAGC
CGAACGAACTAACCGTGTCATTGTTCTTGACCAGGGGAAAATCATTGAAGTTGGTAGTCACCAAGAGTTAATGCAAGCGC
AAGGATTCTACCATCATCTATTCAATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
71.854 |
99.67 |
0.716 |
| comA | Streptococcus mitis NCTC 12261 |
66.007 |
100 |
0.66 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
65.461 |
100 |
0.657 |
| comA | Streptococcus pneumoniae D39 |
65.347 |
100 |
0.653 |
| comA | Streptococcus pneumoniae R6 |
65.347 |
100 |
0.653 |
| comA | Streptococcus pneumoniae Rx1 |
65.347 |
100 |
0.653 |
| comA | Streptococcus mitis SK321 |
65.017 |
100 |
0.65 |
| comA | Streptococcus pneumoniae TIGR4 |
65.017 |
100 |
0.65 |