Detailed information NTG1063710

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACG3JH_RS02440
• Genome accession: NZ_CP171731
• Coordinates: 497855..498694 (+)
• Length: 279 a.a.
• NCBI ID: WP_003106913.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain DB-M1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 492855..503694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JH_RS02415 (ACG3JH_02415)	-	494068..494955 (+)	888	WP_003104209.1	lipoate--protein ligase	-
ACG3JH_RS02420 (ACG3JH_02420)	-	494977..495393 (+)	417	WP_003104767.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACG3JH_RS02425 (ACG3JH_02425)	ylqF	495566..496420 (+)	855	WP_003106918.1	ribosome biogenesis GTPase YlqF	-
ACG3JH_RS02430 (ACG3JH_02430)	-	496404..497177 (+)	774	WP_003108437.1	ribonuclease HII	-
ACG3JH_RS02435 (ACG3JH_02435)	-	497249..497794 (+)	546	WP_003106915.1	sugar O-acetyltransferase	-
ACG3JH_RS02440 (ACG3JH_02440)	dprA	497855..498694 (+)	840	WP_003106913.1	DNA-processing protein DprA	Machinery gene
ACG3JH_RS02445 (ACG3JH_02445)	topA	498800..500935 (+)	2136	WP_003106911.1	type I DNA topoisomerase	-
ACG3JH_RS02450 (ACG3JH_02450)	-	500971..501855 (-)	885	WP_003102535.1	LysR family transcriptional regulator	-
ACG3JH_RS02455 (ACG3JH_02455)	-	502047..503105 (+)	1059	WP_013793942.1	PTS transporter subunit IIC	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 31095.12 Da
• Isoelectric Point: 9.1696

>NTDB_id=1063710 ACG3JH_RS02440 WP_003106913.1 497855..498694(+) (dprA) [Streptococcus parauberis strain DB-M1]
MNNFELYKLKKAGLENHHILKIIAYQEKYDKKLSLRNMALISECKQPIIFIENYKSLDIGAIKNEFNLFPSISIFDKNYP
ISLKSIYNPPVLLFYQGDISLLNQPILGVVGSRQATKKGIHAVDKIIEELNSKFVIVSGLARGIDTAAHFAAIKNGGKTI
AVIGSGMTKFYPKENHRLQKYIANNHLLISEYGPAEEPLAYHFPQRNRIIAGLSLGIIVCEARVRSGSLITCKYALDEGR
DIFAIPGTIVNNNSEGCHQLIKEGAKCVTNGLDILSEYQ

Nucleotide

• Length: 840 bp

>NTDB_id=1063710 ACG3JH_RS02440 WP_003106913.1 497855..498694(+) (dprA) [Streptococcus parauberis strain DB-M1]
ATGAATAATTTCGAACTATACAAATTGAAAAAAGCTGGACTAGAAAATCATCACATTTTAAAAATTATCGCCTATCAGGA
AAAGTATGACAAAAAACTTTCTTTACGTAATATGGCACTCATATCTGAATGCAAGCAACCAATCATTTTTATTGAGAATT
ATAAATCTTTAGACATTGGTGCAATAAAAAATGAATTCAATCTTTTTCCTTCCATTTCAATTTTTGATAAAAACTACCCA
ATTTCTTTAAAATCAATCTATAATCCACCAGTTCTTTTATTTTATCAAGGAGATATTAGCTTATTAAATCAGCCTATTTT
AGGTGTAGTGGGCTCGCGTCAGGCAACAAAAAAAGGTATTCATGCCGTTGATAAAATTATCGAAGAGTTAAATAGTAAGT
TTGTTATTGTAAGTGGATTAGCCAGAGGGATTGATACGGCTGCCCACTTTGCAGCTATCAAAAATGGAGGGAAAACAATT
GCTGTAATTGGTTCAGGGATGACTAAATTTTATCCAAAAGAAAATCATCGACTGCAAAAGTATATTGCAAATAACCATCT
ATTGATTAGTGAATATGGACCAGCAGAAGAACCTTTAGCTTATCATTTTCCTCAACGGAATCGGATAATTGCAGGGCTAT
CATTAGGAATCATAGTCTGTGAAGCCAGAGTCCGTTCTGGAAGTCTAATTACTTGTAAGTATGCACTGGATGAAGGAAGA
GATATTTTTGCAATACCAGGAACGATTGTCAATAATAATTCAGAGGGATGTCACCAGCTTATCAAAGAGGGTGCAAAATG
CGTCACAAATGGCTTAGACATCCTTTCAGAATACCAATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (72-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	64.029	99.642	0.638
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.348	100	0.573
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.348	100	0.573
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.348	100	0.573
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.348	100	0.573
dprA/cilB/dalA	Streptococcus mitis SK321	57.348	100	0.573
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.631	100	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.317	99.642	0.541
dprA	Legionella pneumophila strain ERS1305867	40.345	100	0.419
dprA	Bacillus subtilis subsp. subtilis str. 168	40.927	92.832	0.38
dprA	Glaesserella parasuis strain SC1401	41.6	89.606	0.373