Detailed information NTG0106264

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: AABA14_RS02570
• Genome accession: NZ_AP028607
• Coordinates: 491042..491629 (-)
• Length: 195 a.a.
• NCBI ID: WP_050111533.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Sep2
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 486042..496629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA14_RS02550 (TKY123642_04900)	-	486503..487843 (+)	1341	WP_061764627.1	sensor histidine kinase	-
AABA14_RS02555 (TKY123642_04910)	blpC	487888..488043 (-)	156	WP_000358814.1	quorum-sensing system pheromone BlpC	-
AABA14_RS02560 (TKY123642_04920)	-	488100..489461 (-)	1362	WP_061764626.1	bacteriocin secretion accessory protein	-
AABA14_RS02565 (TKY123642_04930)	comA/nlmT	489472..491148 (-)	1677	WP_338168497.1	peptide cleavage/export ABC transporter	Regulator
AABA14_RS02570 (TKY123642_04940)	comA/nlmT	491042..491629 (-)	588	WP_050111533.1	cysteine peptidase family C39 domain-containing protein	Regulator
AABA14_RS02575 (TKY123642_04950)	blpM	491910..492164 (+)	255	WP_000379879.1	two-peptide bacteriocin subunit BlpM	-
AABA14_RS02580 (TKY123642_04960)	blpN	492180..492383 (+)	204	WP_001099492.1	two-peptide bacteriocin subunit BlpN	-
AABA14_RS02585 (TKY123642_04970)	cipB	492627..492776 (+)	150	WP_001818346.1	bacteriocin-like peptide BlpO	Regulator
AABA14_RS02590	-	492880..492999 (+)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
AABA14_RS02595 (TKY123642_04990)	-	493785..494168 (+)	384	WP_016398494.1	hypothetical protein	-
AABA14_RS02600 (TKY123642_05000)	-	494220..494909 (+)	690	WP_050220778.1	CPBP family intramembrane glutamic endopeptidase	-
AABA14_RS02605	blpZ	495016..495183 (+)	168	WP_309543760.1	immunity protein BlpZ	-
AABA14_RS02610	-	495334..495945 (+)	612	WP_044814721.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 195 a.a.
• Molecular weight: 22296.75 Da
• Isoelectric Point: 9.6188

>NTDB_id=106264 AABA14_RS02570 WP_050111533.1 491042..491629(-) (comA/nlmT) [Streptococcus pneumoniae strain Sep2]
MTSYKRTFVPQIDARDCSVAALASIAKFYGSDFSLAHLRELAKTNKEGTTALGIVKAADEMGFETRPVQADKTLFDMSDV
PYPFIVHVNKEGKLQHYYVVYQTKKDYLIIGDPDPSVKITKMSKERFFYEWTGVAIFLAPKPSYQPHKDKKNGLLSKLPS
SDFQTKISHCLHCSLKLIGHYYQYRWFLLSPRNLG

Nucleotide

• Length: 588 bp

>NTDB_id=106264 AABA14_RS02570 WP_050111533.1 491042..491629(-) (comA/nlmT) [Streptococcus pneumoniae strain Sep2]
ATGACTTCTTATAAACGTACATTTGTTCCTCAAATAGATGCGAGAGACTGTAGTGTCGCTGCCTTAGCCTCGATTGCTAA
ATTCTATGGTTCAGATTTTTCTCTAGCTCACTTGAGAGAACTTGCAAAGACCAATAAAGAAGGGACGACTGCTCTTGGCA
TTGTAAAAGCCGCTGATGAAATGGGCTTTGAAACAAGACCTGTTCAAGCAGATAAAACGCTCTTTGACATGAGTGATGTC
CCCTATCCATTTATCGTTCACGTTAACAAAGAAGGAAAACTCCAACATTACTATGTTGTCTATCAAACAAAGAAAGACTA
TCTGATTATTGGTGATCCTGACCCTTCTGTAAAAATCACTAAAATGTCAAAAGAACGCTTTTTCTATGAATGGACTGGAG
TAGCTATTTTTCTAGCTCCCAAACCCAGCTATCAACCCCATAAAGATAAAAAGAATGGTCTACTAAGCAAGCTTCCTTCC
TCTGATTTTCAAACAAAAATCTCTCATTGCTTACATTGTTCTCTCAAGCTTATTGGTCACTATTATCAATATAGGTGGTT
CTTACTATCTCCAAGGAATCTTGGATGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (7-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	59.89	93.333	0.559
comA	Streptococcus mitis NCTC 12261	54.891	94.359	0.518
comA	Streptococcus mitis SK321	54.348	94.359	0.513
comA	Streptococcus pneumoniae TIGR4	53.804	94.359	0.508
comA	Streptococcus pneumoniae Rx1	53.804	94.359	0.508
comA	Streptococcus pneumoniae D39	53.804	94.359	0.508
comA	Streptococcus pneumoniae R6	53.804	94.359	0.508
comA	Streptococcus gordonii str. Challis substr. CH1	52.717	94.359	0.497