Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACFX5Z_RS03935 | Genome accession | NZ_CP170761 |
| Coordinates | 826512..826832 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain CWH5 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 821512..831832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFX5Z_RS03915 (ACFX5Z_03915) | - | 821814..822491 (-) | 678 | WP_279451555.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| ACFX5Z_RS03920 (ACFX5Z_03920) | - | 822848..823819 (+) | 972 | WP_005309570.1 | response regulator | - |
| ACFX5Z_RS03925 (ACFX5Z_03925) | - | 823895..825292 (-) | 1398 | WP_017783362.1 | peptide MFS transporter | - |
| ACFX5Z_RS03930 (ACFX5Z_03930) | galU | 825506..826417 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACFX5Z_RS03935 (ACFX5Z_03935) | comEA | 826512..826832 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| ACFX5Z_RS03940 (ACFX5Z_03940) | cysQ | 826999..827769 (+) | 771 | WP_279451554.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ACFX5Z_RS03945 (ACFX5Z_03945) | - | 827848..828144 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| ACFX5Z_RS03950 (ACFX5Z_03950) | - | 828169..828732 (-) | 564 | WP_065017542.1 | septation protein A | - |
| ACFX5Z_RS03955 (ACFX5Z_03955) | - | 828837..830342 (-) | 1506 | WP_279451553.1 | pyridoxal-dependent decarboxylase | - |
| ACFX5Z_RS03960 (ACFX5Z_03960) | - | 830561..831196 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=1059300 ACFX5Z_RS03935 WP_005309580.1 826512..826832(-) (comEA) [Aeromonas dhakensis strain CWH5]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=1059300 ACFX5Z_RS03935 WP_005309580.1 826512..826832(-) (comEA) [Aeromonas dhakensis strain CWH5]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACTGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAGGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTCAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACTGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAGGCAAATCGGGACATGATCATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |