Detailed information NTG0105918

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AABA08_RS09365
• Genome accession: NZ_AP028602
• Coordinates: 1826987..1827391 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PF2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1821987..1832391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABA08_RS09325 (TKY092604_18140)	rnpA	1822402..1822773 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AABA08_RS09330	-	1822790..1822921 (-)	132	WP_000768904.1	hypothetical protein	-
AABA08_RS09335 (TKY092604_18150)	-	1822922..1824112 (-)	1191	WP_000167769.1	acetate kinase	-
AABA08_RS09340 (TKY092604_18160)	comYH	1824163..1825116 (-)	954	WP_000345080.1	class I SAM-dependent methyltransferase	Machinery gene
AABA08_RS09345	-	1825177..1825771 (-)	595	Protein_1816	class I SAM-dependent methyltransferase	-
AABA08_RS09350 (TKY092604_18190)	comGG/cglG	1825874..1826320 (-)	447	WP_001842224.1	competence type IV pilus minor pilin ComGG	Machinery gene
AABA08_RS09355	comGF/cglF	1826298..1826759 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
AABA08_RS09360 (TKY092604_18210)	comGE/cglE	1826722..1827024 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
AABA08_RS09365 (TKY092604_18220)	comGD/cglD	1826987..1827391 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
AABA08_RS09370 (TKY092604_18230)	comGC/cglC	1827384..1827710 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
AABA08_RS09375 (TKY092604_18240)	comGB/cglB	1827712..1828728 (-)	1017	WP_078102766.1	competence type IV pilus assembly protein ComGB	Machinery gene
AABA08_RS09380 (TKY092604_18250)	comGA/cglA/cilD	1828676..1829617 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
AABA08_RS09385 (TKY092604_18260)	-	1829693..1830058 (-)	366	WP_000286415.1	DUF1033 family protein	-
AABA08_RS09390 (TKY092604_18270)	-	1830209..1831267 (-)	1059	WP_000649470.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=105918 AABA08_RS09365 WP_000588030.1 1826987..1827391(-) (comGD/cglD) [Streptococcus pneumoniae strain PF2]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=105918 AABA08_RS09365 WP_000588030.1 1826987..1827391(-) (comGD/cglD) [Streptococcus pneumoniae strain PF2]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463