Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | VWC80_RS26715 | Genome accession | NZ_CP170495 |
| Coordinates | 5120331..5120912 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus thuringiensis strain IPPBIOTSUC-1012 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5115331..5125912
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VWC80_RS26665 (VWC80_26645) | - | 5115377..5115658 (-) | 282 | WP_232487508.1 | phage integrase N-terminal SAM-like domain-containing protein | - |
| VWC80_RS26670 (VWC80_26650) | - | 5115670..5115819 (-) | 150 | WP_232487509.1 | hypothetical protein | - |
| VWC80_RS26680 (VWC80_26660) | - | 5116327..5116533 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| VWC80_RS26685 (VWC80_26665) | - | 5116627..5117112 (+) | 486 | WP_001228546.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| VWC80_RS26690 (VWC80_26670) | spoVAC | 5117142..5117618 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| VWC80_RS26695 (VWC80_26675) | spoVAD | 5117619..5118635 (+) | 1017 | WP_000938972.1 | stage V sporulation protein AD | - |
| VWC80_RS26700 (VWC80_26680) | spoVAE | 5118632..5118982 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| VWC80_RS26705 (VWC80_26685) | - | 5118994..5119200 (+) | 207 | WP_000215909.1 | DUF1657 domain-containing protein | - |
| VWC80_RS26710 (VWC80_26690) | - | 5119221..5120090 (+) | 870 | WP_000018924.1 | DUF421 domain-containing protein | - |
| VWC80_RS26715 (VWC80_26695) | clpP | 5120331..5120912 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| VWC80_RS26720 (VWC80_26700) | - | 5121556..5121804 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| VWC80_RS26725 (VWC80_26705) | whiA | 5121828..5122778 (-) | 951 | WP_000006560.1 | DNA-binding protein WhiA | - |
| VWC80_RS26730 (VWC80_26710) | yvcK | 5122867..5123820 (-) | 954 | WP_000712186.1 | YvcK family protein | - |
| VWC80_RS26735 (VWC80_26715) | rapZ | 5123824..5124705 (-) | 882 | WP_000138459.1 | RNase adapter RapZ | - |
| VWC80_RS26740 (VWC80_26720) | - | 5124726..5125184 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=1057758 VWC80_RS26715 WP_001049162.1 5120331..5120912(+) (clpP) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=1057758 VWC80_RS26715 WP_001049162.1 5120331..5120912(+) (clpP) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATTGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAGCCACAAGTATCAACAATCTGTATCGGTATGGCAGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGAGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAAATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATTGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAGCCACAAGTATCAACAATCTGTATCGGTATGGCAGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGAGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCAGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAAATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |