Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | VWC80_RS14370 | Genome accession | NZ_CP170495 |
| Coordinates | 2766265..2766846 (-) | Length | 193 a.a. |
| NCBI ID | WP_000991611.1 | Uniprot ID | A0A9W5V399 |
| Organism | Bacillus thuringiensis strain IPPBIOTSUC-1012 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2761265..2771846
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VWC80_RS14340 (VWC80_14320) | - | 2761888..2762388 (-) | 501 | WP_002005170.1 | HIT family protein | - |
| VWC80_RS14345 (VWC80_14325) | - | 2762480..2762647 (-) | 168 | WP_002196584.1 | hypothetical protein | - |
| VWC80_RS14350 (VWC80_14330) | - | 2762865..2763101 (+) | 237 | WP_151153831.1 | hypothetical protein | - |
| VWC80_RS14355 (VWC80_14335) | - | 2763155..2763991 (-) | 837 | WP_001084760.1 | proline/glycine betaine ABC transporter permease | - |
| VWC80_RS14360 (VWC80_14340) | - | 2763984..2765189 (-) | 1206 | WP_000370606.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| VWC80_RS14365 (VWC80_14345) | - | 2765361..2766218 (+) | 858 | WP_001227619.1 | glycine betaine ABC transporter substrate-binding protein | - |
| VWC80_RS14370 (VWC80_14350) | clpP | 2766265..2766846 (-) | 582 | WP_000991611.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| VWC80_RS14375 (VWC80_14355) | - | 2766868..2767554 (-) | 687 | WP_087875444.1 | RNA polymerase subunit sigma-70 | - |
| VWC80_RS14380 (VWC80_14360) | - | 2767697..2768017 (+) | 321 | WP_001125395.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| VWC80_RS14385 (VWC80_14365) | rpiA | 2768022..2768684 (+) | 663 | WP_001049987.1 | ribose 5-phosphate isomerase A | - |
| VWC80_RS14390 (VWC80_14370) | - | 2768799..2769233 (+) | 435 | WP_001190864.1 | GNAT family N-acetyltransferase | - |
| VWC80_RS14395 (VWC80_14375) | - | 2769360..2770727 (-) | 1368 | WP_001065164.1 | lytic polysaccharide monooxygenase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21191.46 Da Isoelectric Point: 5.3277
>NTDB_id=1057742 VWC80_RS14370 WP_000991611.1 2766265..2766846(-) (clpP) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDNVVTKK
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDNVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=1057742 VWC80_RS14370 WP_000991611.1 2766265..2766846(-) (clpP) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
GGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TAACGTTGTTACGAAAAAATAA
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
GGCAAAAGGAAAACGGTTTGCTCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TAACGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.586 |
98.964 |
0.679 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.196 |
97.927 |
0.658 |
| clpP | Streptococcus pyogenes JRS4 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pyogenes MGAS315 |
56.085 |
97.927 |
0.549 |
| clpP | Streptococcus pneumoniae R6 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae Rx1 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus thermophilus LMD-9 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus pneumoniae D39 |
55.208 |
99.482 |
0.549 |
| clpP | Streptococcus mutans UA159 |
53.968 |
97.927 |
0.528 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.381 |
97.927 |
0.513 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.265 |
97.927 |
0.492 |