Detailed information NTG1055625

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACFDHW_RS10170
• Genome accession: NZ_CP170222
• Coordinates: 2050367..2050687 (-)
• Length: 106 a.a.
• NCBI ID: WP_107632995.1
• Uniprot ID: -
• Organism: Staphylococcus hyicus strain SC382
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2045367..2055687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDHW_RS10140 (ACFDHW_10145)	gcvPA	2045975..2047324 (-)	1350	WP_107632991.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ACFDHW_RS10145 (ACFDHW_10150)	gcvT	2047336..2048427 (-)	1092	WP_107632992.1	glycine cleavage system aminomethyltransferase GcvT	-
ACFDHW_RS10150 (ACFDHW_10155)	-	2048582..2049112 (-)	531	WP_107632993.1	shikimate kinase	-
ACFDHW_RS10155 (ACFDHW_10160)	-	2049090..2049287 (-)	198	WP_039645590.1	hypothetical protein	-
ACFDHW_RS10160 (ACFDHW_10165)	-	2049271..2049753 (-)	483	WP_039645587.1	competence type IV pilus minor pilin ComGF	-
ACFDHW_RS10165 (ACFDHW_10170)	comGD	2049946..2050377 (-)	432	WP_209260663.1	competence type IV pilus minor pilin ComGD	-
ACFDHW_RS10170 (ACFDHW_10175)	comGC	2050367..2050687 (-)	321	WP_107632995.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFDHW_RS10175 (ACFDHW_10180)	comGB	2050699..2051766 (-)	1068	WP_119635812.1	competence type IV pilus assembly protein ComGB	-
ACFDHW_RS10180 (ACFDHW_10185)	comGA	2051735..2052709 (-)	975	WP_257070565.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFDHW_RS10185 (ACFDHW_10190)	-	2052765..2053388 (-)	624	WP_107632997.1	MBL fold metallo-hydrolase	-
ACFDHW_RS10190 (ACFDHW_10195)	-	2053403..2053714 (-)	312	WP_039645576.1	MTH1187 family thiamine-binding protein	-
ACFDHW_RS10195 (ACFDHW_10200)	-	2053716..2054702 (-)	987	WP_039645573.1	ROK family glucokinase	-
ACFDHW_RS10200 (ACFDHW_10205)	-	2054699..2054902 (-)	204	WP_039645571.1	YqgQ family protein	-

Sequence

Protein

• Length: 106 a.a.
• Molecular weight: 11824.09 Da
• Isoelectric Point: 9.5056

>NTDB_id=1055625 ACFDHW_RS10170 WP_107632995.1 2050367..2050687(-) (comGC) [Staphylococcus hyicus strain SC382]
MLKIINILKNKKGFTLIEMLLVLLIISVLLILIIPNIAKQSDHIQKTGCAAQLKLVDSQIEAYTLKYNRKPTSIDELIQE
GYIKDNQKNCKSGETITIRGGEAVVS

Nucleotide

• Length: 321 bp

>NTDB_id=1055625 ACFDHW_RS10170 WP_107632995.1 2050367..2050687(-) (comGC) [Staphylococcus hyicus strain SC382]
ATGCTTAAGATCATTAATATATTAAAAAACAAAAAAGGGTTTACTTTAATCGAAATGTTATTGGTTTTACTCATCATTAG
TGTTTTATTAATATTAATAATTCCTAATATAGCCAAACAATCTGATCACATTCAAAAGACTGGATGCGCAGCACAACTTA
AACTCGTAGACAGTCAAATTGAAGCTTACACTTTAAAATACAACCGTAAGCCAACATCAATTGATGAGCTAATTCAAGAA
GGATATATTAAAGATAATCAAAAAAACTGTAAAAGTGGGGAAACTATCACAATTCGTGGTGGCGAAGCTGTTGTCTCATA
A

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (9-33)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	68.932	97.17	0.67
comGC	Staphylococcus aureus MW2	68.932	97.17	0.67
comGC	Bacillus subtilis subsp. subtilis str. 168	44.33	91.509	0.406
comGC/cglC	Streptococcus mitis SK321	46.067	83.962	0.387
comGC/cglC	Streptococcus mitis NCTC 12261	46.067	83.962	0.387
comYC	Streptococcus suis isolate S10	52.632	71.698	0.377
comGC/cglC	Streptococcus pneumoniae D39	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae R6	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae TIGR4	44.944	83.962	0.377
comGC/cglC	Streptococcus pneumoniae Rx1	44.944	83.962	0.377