Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BCT18_RS08855 | Genome accession | NZ_CP170034 |
| Coordinates | 1907675..1907974 (+) | Length | 99 a.a. |
| NCBI ID | WP_010439527.1 | Uniprot ID | A0AAN0LKD1 |
| Organism | Vibrio cyclitrophicus strain 10N.222.54.F11 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1902675..1912974
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCT18_RS08845 (BCT18_08845) | - | 1905043..1905336 (+) | 294 | WP_012604504.1 | HU family DNA-binding protein | - |
| BCT18_RS08850 (BCT18_08850) | ppiD | 1905558..1907430 (+) | 1873 | Protein_1622 | peptidylprolyl isomerase | - |
| BCT18_RS08855 (BCT18_08855) | comEA | 1907675..1907974 (+) | 300 | WP_010439527.1 | ComEA family DNA-binding protein | Machinery gene |
| BCT18_RS08860 (BCT18_08860) | rrtA | 1907994..1908530 (-) | 537 | WP_016767082.1 | rhombosortase | - |
| BCT18_RS08865 (BCT18_08865) | - | 1908540..1909139 (+) | 600 | WP_010439531.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| BCT18_RS08870 (BCT18_08870) | - | 1909172..1910515 (-) | 1344 | WP_010439534.1 | anti-phage deoxyguanosine triphosphatase | - |
| BCT18_RS08875 (BCT18_08875) | yfbR | 1910570..1910959 (-) | 390 | WP_080659639.1 | 5'-deoxynucleotidase | - |
| BCT18_RS08880 (BCT18_08880) | - | 1911312..1911683 (+) | 372 | WP_016789038.1 | hypothetical protein | - |
| BCT18_RS08885 (BCT18_08885) | - | 1912081..1912608 (-) | 528 | WP_016789037.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10811.39 Da Isoelectric Point: 5.1299
>NTDB_id=1054891 BCT18_RS08855 WP_010439527.1 1907675..1907974(+) (comEA) [Vibrio cyclitrophicus strain 10N.222.54.F11]
MRTIYSTLLLSFLITLSAGVFADSPTKAELYDGIEITVNINKATAEELSALLVGVGDKKAQEIVDYRDKHGAFTKPSDLV
NVKGIGEATVEKNRERIQL
MRTIYSTLLLSFLITLSAGVFADSPTKAELYDGIEITVNINKATAEELSALLVGVGDKKAQEIVDYRDKHGAFTKPSDLV
NVKGIGEATVEKNRERIQL
Nucleotide
Download Length: 300 bp
>NTDB_id=1054891 BCT18_RS08855 WP_010439527.1 1907675..1907974(+) (comEA) [Vibrio cyclitrophicus strain 10N.222.54.F11]
ATGCGAACAATATATTCAACATTACTTCTTTCATTTCTAATTACTCTGAGTGCTGGAGTGTTTGCTGATAGTCCGACTAA
GGCAGAGTTGTACGACGGCATTGAAATCACCGTAAACATCAATAAAGCTACGGCTGAGGAATTATCAGCATTACTTGTTG
GTGTGGGTGACAAAAAAGCCCAAGAGATTGTCGATTATCGGGATAAGCATGGTGCATTTACAAAACCCAGTGACTTGGTC
AATGTGAAAGGTATTGGCGAGGCAACGGTTGAAAAGAATCGTGAGCGAATTCAACTTTAA
ATGCGAACAATATATTCAACATTACTTCTTTCATTTCTAATTACTCTGAGTGCTGGAGTGTTTGCTGATAGTCCGACTAA
GGCAGAGTTGTACGACGGCATTGAAATCACCGTAAACATCAATAAAGCTACGGCTGAGGAATTATCAGCATTACTTGTTG
GTGTGGGTGACAAAAAAGCCCAAGAGATTGTCGATTATCGGGATAAGCATGGTGCATTTACAAAACCCAGTGACTTGGTC
AATGTGAAAGGTATTGGCGAGGCAACGGTTGAAAAGAATCGTGAGCGAATTCAACTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
56.383 |
94.949 |
0.535 |
| comEA | Vibrio campbellii strain DS40M4 |
55.435 |
92.929 |
0.515 |
| comEA | Vibrio cholerae strain A1552 |
52.577 |
97.98 |
0.515 |
| comEA | Vibrio cholerae C6706 |
52.577 |
97.98 |
0.515 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
36.937 |
100 |
0.414 |
| comEA | Acinetobacter baylyi ADP1 |
46.341 |
82.828 |
0.384 |
| comEA | Lactococcus lactis subsp. cremoris KW2 |
44.444 |
81.818 |
0.364 |