Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BCV36_RS02995 | Genome accession | NZ_CP169997 |
| Coordinates | 691219..691518 (+) | Length | 99 a.a. |
| NCBI ID | WP_010439527.1 | Uniprot ID | A0AAN0LKD1 |
| Organism | Vibrio cyclitrophicus strain 10N.286.55.C4 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 686219..696518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV36_RS02985 (BCV36_02985) | - | 688582..688875 (+) | 294 | WP_012604504.1 | HU family DNA-binding protein | - |
| BCV36_RS02990 (BCV36_02990) | ppiD | 689097..690974 (+) | 1878 | WP_102386777.1 | peptidylprolyl isomerase | - |
| BCV36_RS02995 (BCV36_02995) | comEA | 691219..691518 (+) | 300 | WP_010439527.1 | ComEA family DNA-binding protein | Machinery gene |
| BCV36_RS03000 (BCV36_03000) | rrtA | 691538..692074 (-) | 537 | WP_016767082.1 | rhombosortase | - |
| BCV36_RS03005 (BCV36_03005) | - | 692084..692683 (+) | 600 | WP_010439531.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| BCV36_RS03010 (BCV36_03010) | - | 692715..694058 (-) | 1344 | WP_010439534.1 | anti-phage deoxyguanosine triphosphatase | - |
| BCV36_RS03015 (BCV36_03015) | yfbR | 694113..694697 (-) | 585 | WP_010439536.1 | 5'-deoxynucleotidase | - |
| BCV36_RS03020 (BCV36_03020) | - | 694867..696099 (-) | 1233 | WP_102386776.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10811.39 Da Isoelectric Point: 5.1299
>NTDB_id=1054181 BCV36_RS02995 WP_010439527.1 691219..691518(+) (comEA) [Vibrio cyclitrophicus strain 10N.286.55.C4]
MRTIYSTLLLSFLITLSAGVFADSPTKAELYDGIEITVNINKATAEELSALLVGVGDKKAQEIVDYRDKHGAFTKPSDLV
NVKGIGEATVEKNRERIQL
MRTIYSTLLLSFLITLSAGVFADSPTKAELYDGIEITVNINKATAEELSALLVGVGDKKAQEIVDYRDKHGAFTKPSDLV
NVKGIGEATVEKNRERIQL
Nucleotide
Download Length: 300 bp
>NTDB_id=1054181 BCV36_RS02995 WP_010439527.1 691219..691518(+) (comEA) [Vibrio cyclitrophicus strain 10N.286.55.C4]
ATGCGAACAATATATTCAACATTACTTCTTTCATTTCTAATTACTCTGAGTGCTGGAGTGTTTGCTGATAGTCCGACTAA
GGCAGAGTTGTACGACGGCATTGAAATCACCGTAAACATCAATAAAGCTACGGCTGAGGAATTATCAGCATTACTTGTTG
GTGTGGGTGACAAAAAAGCCCAAGAGATTGTCGATTATCGGGATAAGCATGGTGCATTTACAAAACCCAGTGACTTGGTC
AATGTGAAAGGTATTGGCGAGGCAACGGTTGAAAAGAATCGTGAGCGAATTCAACTTTAA
ATGCGAACAATATATTCAACATTACTTCTTTCATTTCTAATTACTCTGAGTGCTGGAGTGTTTGCTGATAGTCCGACTAA
GGCAGAGTTGTACGACGGCATTGAAATCACCGTAAACATCAATAAAGCTACGGCTGAGGAATTATCAGCATTACTTGTTG
GTGTGGGTGACAAAAAAGCCCAAGAGATTGTCGATTATCGGGATAAGCATGGTGCATTTACAAAACCCAGTGACTTGGTC
AATGTGAAAGGTATTGGCGAGGCAACGGTTGAAAAGAATCGTGAGCGAATTCAACTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
56.383 |
94.949 |
0.535 |
| comEA | Vibrio campbellii strain DS40M4 |
55.435 |
92.929 |
0.515 |
| comEA | Vibrio cholerae strain A1552 |
52.577 |
97.98 |
0.515 |
| comEA | Vibrio cholerae C6706 |
52.577 |
97.98 |
0.515 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
36.937 |
100 |
0.414 |
| comEA | Acinetobacter baylyi ADP1 |
46.341 |
82.828 |
0.384 |
| comEA | Lactococcus lactis subsp. cremoris KW2 |
44.444 |
81.818 |
0.364 |