Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   SPAP1_RS05500 Genome accession   NZ_CP007537
Coordinates   1059073..1059255 (-) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain AP1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1054073..1064255
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPAP1_RS05475 (SPAP1_05460) msrB 1054788..1055225 (-) 438 WP_010922255.1 peptide-methionine (R)-S-oxide reductase MsrB -
  SPAP1_RS05480 (SPAP1_05465) slc2 1055411..1056229 (-) 819 WP_029714016.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  SPAP1_RS05485 (SPAP1_05470) lepA 1056487..1058319 (-) 1833 WP_010922253.1 translation elongation factor 4 -
  SPAP1_RS10325 - 1058443..1058850 (-) 408 Protein_1042 nucleoside-diphosphate kinase -
  SPAP1_RS05500 (SPAP1_05485) prx 1059073..1059255 (-) 183 WP_029714017.1 hypothetical protein Regulator
  SPAP1_RS05505 (SPAP1_05490) - 1059454..1059663 (-) 210 WP_011054450.1 helix-turn-helix transcriptional regulator -
  SPAP1_RS05510 (SPAP1_05495) - 1060104..1060355 (+) 252 WP_011054448.1 hypothetical protein -
  SPAP1_RS05515 (SPAP1_05500) - 1060619..1060858 (+) 240 WP_011054447.1 hypothetical protein -
  SPAP1_RS05520 (SPAP1_05505) - 1060916..1061272 (+) 357 WP_011054446.1 hypothetical protein -
  SPAP1_RS05525 (SPAP1_05510) - 1061388..1062593 (-) 1206 WP_029714018.1 glucosaminidase domain-containing protein -
  SPAP1_RS05535 (SPAP1_05520) - 1062716..1062943 (-) 228 WP_029714020.1 phage holin -
  SPAP1_RS05540 (SPAP1_05525) - 1062940..1063212 (-) 273 WP_011017397.1 hypothetical protein -
  SPAP1_RS05545 (SPAP1_05530) - 1063224..1063862 (-) 639 WP_046735270.1 hypothetical protein -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=105307 SPAP1_RS05500 WP_029714017.1 1059073..1059255(-) (prx) [Streptococcus pyogenes strain AP1]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=105307 SPAP1_RS05500 WP_029714017.1 1059073..1059255(-) (prx) [Streptococcus pyogenes strain AP1]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment