Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SPAP1_RS02910 Genome accession   NZ_CP007537
Coordinates   555280..555462 (+) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain AP1     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 550280..560462
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPAP1_RS10570 (SPAP1_02865) - 550654..550776 (+) 123 WP_029713948.1 hypothetical protein -
  SPAP1_RS02885 (SPAP1_02870) - 550764..551969 (+) 1206 WP_011888700.1 glucosaminidase domain-containing protein -
  SPAP1_RS02890 (SPAP1_02875) - 552109..552633 (+) 525 WP_011017840.1 type II toxin-antitoxin system antitoxin SocA domain-containing protein -
  SPAP1_RS02895 (SPAP1_02880) - 552621..553487 (+) 867 WP_011888701.1 DUF334 domain-containing protein -
  SPAP1_RS02900 (SPAP1_02885) - 553537..553971 (-) 435 WP_011017966.1 hypothetical protein -
  SPAP1_RS02905 (SPAP1_02890) sda3 554242..555042 (-) 801 WP_011285611.1 streptodornase Sda3 -
  SPAP1_RS02910 (SPAP1_02895) prx 555280..555462 (+) 183 WP_011184907.1 hypothetical protein Regulator
  SPAP1_RS02915 (SPAP1_02900) rlmD 555653..557008 (+) 1356 WP_010922532.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  SPAP1_RS02920 (SPAP1_02905) rocA 557673..559028 (+) 1356 WP_010922531.1 transcriptional regulator RocA -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=105285 SPAP1_RS02910 WP_011184907.1 555280..555462(+) (prx) [Streptococcus pyogenes strain AP1]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=105285 SPAP1_RS02910 WP_011184907.1 555280..555462(+) (prx) [Streptococcus pyogenes strain AP1]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment