Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AB3U57_RS16260 | Genome accession | NZ_CP168976 |
| Coordinates | 3161063..3161644 (-) | Length | 193 a.a. |
| NCBI ID | WP_001092372.1 | Uniprot ID | A0A9W5R6W8 |
| Organism | Bacillus cereus strain QKG-2024 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3156063..3166644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3U57_RS16225 (AB3U57_16225) | - | 3156080..3156916 (-) | 837 | WP_000556966.1 | PP2C family serine/threonine-protein phosphatase | - |
| AB3U57_RS16230 (AB3U57_16230) | - | 3156900..3157213 (-) | 314 | Protein_3126 | hypothetical protein | - |
| AB3U57_RS16235 (AB3U57_16235) | - | 3157305..3157472 (-) | 168 | WP_000508401.1 | hypothetical protein | - |
| AB3U57_RS16240 (AB3U57_16240) | - | 3157690..3157902 (+) | 213 | WP_065382618.1 | hypothetical protein | - |
| AB3U57_RS16245 (AB3U57_16245) | - | 3157956..3158792 (-) | 837 | WP_001084765.1 | proline/glycine betaine ABC transporter permease | - |
| AB3U57_RS16250 (AB3U57_16250) | - | 3158785..3159990 (-) | 1206 | WP_000370606.1 | glycine betaine/L-proline ABC transporter ATP-binding protein | - |
| AB3U57_RS16255 (AB3U57_16255) | - | 3160162..3161019 (+) | 858 | WP_072770038.1 | glycine betaine ABC transporter substrate-binding protein | - |
| AB3U57_RS16260 (AB3U57_16260) | clpP | 3161063..3161644 (-) | 582 | WP_001092372.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AB3U57_RS16265 (AB3U57_16265) | - | 3161666..3162352 (-) | 687 | WP_072770037.1 | RNA polymerase subunit sigma-70 | - |
| AB3U57_RS16270 (AB3U57_16270) | - | 3162495..3162815 (+) | 321 | WP_001125388.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| AB3U57_RS16275 (AB3U57_16275) | rpiA | 3162820..3163482 (+) | 663 | WP_001049991.1 | ribose 5-phosphate isomerase A | - |
| AB3U57_RS16280 (AB3U57_16280) | - | 3163594..3164028 (+) | 435 | WP_065382634.1 | GNAT family N-acetyltransferase | - |
| AB3U57_RS16285 (AB3U57_16285) | - | 3164155..3165522 (-) | 1368 | WP_072770036.1 | lytic polysaccharide monooxygenase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21238.47 Da Isoelectric Point: 5.0776
>NTDB_id=1049143 AB3U57_RS16260 WP_001092372.1 3161063..3161644(-) (clpP) [Bacillus cereus strain QKG-2024]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK
Nucleotide
Download Length: 582 bp
>NTDB_id=1049143 AB3U57_RS16260 WP_001092372.1 3161063..3161644(-) (clpP) [Bacillus cereus strain QKG-2024]
ATGAATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTGAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA
ATGAATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
TGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTGAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
68.586 |
98.964 |
0.679 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.725 |
97.927 |
0.663 |
| clpP | Streptococcus pyogenes JRS4 |
56.614 |
97.927 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
56.614 |
97.927 |
0.554 |
| clpP | Streptococcus pneumoniae R6 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae TIGR4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae Rx1 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMG 18311 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus thermophilus LMD-9 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pneumoniae D39 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
54.497 |
97.927 |
0.534 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.91 |
97.927 |
0.518 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.794 |
97.927 |
0.497 |