Detailed information NTG1048988

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACEQ85_RS09535
• Genome accession: NZ_CP168966
• Coordinates: 2008096..2009154 (+)
• Length: 352 a.a.
• NCBI ID: WP_373882522.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain LS-AP
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2003096..2014154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEQ85_RS09520 (ACEQ85_09520)	-	2004159..2004491 (+)	333	WP_068563962.1	hypothetical protein	-
ACEQ85_RS09525 (ACEQ85_09525)	rrmA	2004494..2005318 (+)	825	WP_373882520.1	putative RNA methyltransferase	-
ACEQ85_RS09530 (ACEQ85_09530)	ponA	2005373..2007934 (-)	2562	WP_373882521.1	penicillin-binding protein PBP1a	-
ACEQ85_RS09535 (ACEQ85_09535)	pilM	2008096..2009154 (+)	1059	WP_373882522.1	pilus assembly protein PilM	Machinery gene
ACEQ85_RS09540 (ACEQ85_09540)	pilN	2009154..2009795 (+)	642	WP_033848908.1	PilN domain-containing protein	Machinery gene
ACEQ85_RS09545 (ACEQ85_09545)	pilO	2009792..2010544 (+)	753	WP_060464993.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACEQ85_RS09550 (ACEQ85_09550)	pilP	2010555..2011082 (+)	528	WP_068563956.1	pilus assembly protein PilP	Machinery gene
ACEQ85_RS09555 (ACEQ85_09555)	pilQ	2011145..2013271 (+)	2127	WP_068563954.1	type IV pilus secretin PilQ	Machinery gene
ACEQ85_RS09560 (ACEQ85_09560)	aroK	2013283..2013852 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39038.62 Da
• Isoelectric Point: 4.4657

>NTDB_id=1048988 ACEQ85_RS09535 WP_373882522.1 2008096..2009154(+) (pilM) [Acinetobacter pittii strain LS-AP]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRAENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1048988 ACEQ85_RS09535 WP_373882522.1 2008096..2009154(+) (pilM) [Acinetobacter pittii strain LS-AP]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATTGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAGCAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGTGGCAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTACTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAGAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	80.966	100	0.81
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423