Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ACEPM1_RS02790 | Genome accession | NZ_CP168737 |
| Coordinates | 587499..588020 (+) | Length | 173 a.a. |
| NCBI ID | WP_028852632.1 | Uniprot ID | A0A454TT80 |
| Organism | Ralstonia pseudosolanacearum strain RUN3149 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 582499..593020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEPM1_RS02765 (ACEPM1_02765) | recX | 582878..583357 (+) | 480 | WP_020831287.1 | recombination regulator RecX | - |
| ACEPM1_RS02770 (ACEPM1_02770) | - | 583632..584258 (+) | 627 | WP_028852631.1 | DUF2889 domain-containing protein | - |
| ACEPM1_RS02775 (ACEPM1_02775) | sucC | 584325..585491 (+) | 1167 | WP_011000513.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| ACEPM1_RS02780 (ACEPM1_02780) | sucD | 585576..586457 (+) | 882 | WP_011000514.1 | succinate--CoA ligase subunit alpha | - |
| ACEPM1_RS02785 (ACEPM1_02785) | - | 586607..587305 (+) | 699 | WP_197343116.1 | TerC family protein | - |
| ACEPM1_RS02790 (ACEPM1_02790) | pilA | 587499..588020 (+) | 522 | WP_028852632.1 | pilin | Machinery gene |
| ACEPM1_RS02795 (ACEPM1_02795) | pilA | 588287..588796 (+) | 510 | WP_020831292.1 | pilin | Machinery gene |
| ACEPM1_RS02800 (ACEPM1_02800) | - | 588873..590606 (+) | 1734 | WP_028852633.1 | PglL family O-oligosaccharyltransferase | - |
| ACEPM1_RS02805 (ACEPM1_02805) | moaC | 590836..591312 (-) | 477 | WP_011000519.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 17776.47 Da Isoelectric Point: 10.2418
>NTDB_id=1045424 ACEPM1_RS02790 WP_028852632.1 587499..588020(+) (pilA) [Ralstonia pseudosolanacearum strain RUN3149]
MASKHSRNRRRGQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVIEGLALAGQAKALVVENAANAQSSLSLGSASL
PASKNVSALNIDSSTGEIAVVYASAVTGAGANTLVLTPYSGSSSVFGNLQAGSTPPAMVLWVCAAAGKSMPVNTVTQRTT
ATLPPKYAPSECR
MASKHSRNRRRGQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVIEGLALAGQAKALVVENAANAQSSLSLGSASL
PASKNVSALNIDSSTGEIAVVYASAVTGAGANTLVLTPYSGSSSVFGNLQAGSTPPAMVLWVCAAAGKSMPVNTVTQRTT
ATLPPKYAPSECR
Nucleotide
Download Length: 522 bp
>NTDB_id=1045424 ACEPM1_RS02790 WP_028852632.1 587499..588020(+) (pilA) [Ralstonia pseudosolanacearum strain RUN3149]
ATGGCATCGAAGCACAGCAGGAACAGGCGGCGTGGCCAGCGCGGCTTTACATTGATCGAGTTGATGATCGTGGTGGCGAT
CATCGGGATTTTGGCGGCGCTGGCGATTCCGGCGTATCAGGACTACACGATCCGGTCGCGTGTGATCGAGGGGCTGGCAC
TGGCAGGGCAAGCCAAGGCGTTGGTGGTTGAAAATGCCGCCAACGCACAGAGTAGCCTGTCACTCGGTTCCGCATCGTTG
CCGGCCAGCAAGAACGTCAGTGCTCTGAATATTGATTCGTCCACCGGCGAAATCGCGGTGGTCTATGCATCCGCTGTTAC
GGGAGCGGGGGCGAATACGTTGGTATTGACCCCATACTCCGGCAGTTCGTCAGTATTTGGCAATTTGCAGGCAGGTTCAA
CGCCACCGGCAATGGTGCTGTGGGTGTGTGCCGCCGCTGGCAAGTCGATGCCGGTCAATACCGTTACCCAGAGGACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGCCGTTGA
ATGGCATCGAAGCACAGCAGGAACAGGCGGCGTGGCCAGCGCGGCTTTACATTGATCGAGTTGATGATCGTGGTGGCGAT
CATCGGGATTTTGGCGGCGCTGGCGATTCCGGCGTATCAGGACTACACGATCCGGTCGCGTGTGATCGAGGGGCTGGCAC
TGGCAGGGCAAGCCAAGGCGTTGGTGGTTGAAAATGCCGCCAACGCACAGAGTAGCCTGTCACTCGGTTCCGCATCGTTG
CCGGCCAGCAAGAACGTCAGTGCTCTGAATATTGATTCGTCCACCGGCGAAATCGCGGTGGTCTATGCATCCGCTGTTAC
GGGAGCGGGGGCGAATACGTTGGTATTGACCCCATACTCCGGCAGTTCGTCAGTATTTGGCAATTTGCAGGCAGGTTCAA
CGCCACCGGCAATGGTGCTGTGGGTGTGTGCCGCCGCTGGCAAGTCGATGCCGGTCAATACCGTTACCCAGAGGACGACG
GCTACGTTGCCACCGAAATACGCGCCCTCGGAGTGCCGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
51.705 |
100 |
0.526 |
| pilA2 | Legionella pneumophila str. Paris |
44.848 |
95.376 |
0.428 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
44.242 |
95.376 |
0.422 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.263 |
100 |
0.387 |
| comP | Acinetobacter baylyi ADP1 |
40.741 |
93.642 |
0.382 |