Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACEO96_RS05570 | Genome accession | NZ_CP168657 |
| Coordinates | 1206686..1206985 (+) | Length | 99 a.a. |
| NCBI ID | WP_373433358.1 | Uniprot ID | - |
| Organism | Vibrio anguillarum strain VA1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1201686..1211985
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEO96_RS05555 (ACEO96_05555) | lon | 1201713..1204064 (+) | 2352 | WP_013857184.1 | endopeptidase La | - |
| ACEO96_RS05560 (ACEO96_05560) | - | 1204260..1204532 (+) | 273 | WP_026027116.1 | HU family DNA-binding protein | - |
| ACEO96_RS05565 (ACEO96_05565) | ppiD | 1204690..1206549 (+) | 1860 | WP_373433306.1 | peptidylprolyl isomerase | - |
| ACEO96_RS05570 (ACEO96_05570) | comEA | 1206686..1206985 (+) | 300 | WP_373433358.1 | ComEA family DNA-binding protein | Machinery gene |
| ACEO96_RS05575 (ACEO96_05575) | cmk | 1207149..1207829 (+) | 681 | WP_013857180.1 | (d)CMP kinase | - |
| ACEO96_RS05580 (ACEO96_05580) | rpsA | 1207933..1209603 (+) | 1671 | WP_013857179.1 | 30S ribosomal protein S1 | - |
| ACEO96_RS05585 (ACEO96_05585) | ihfB | 1209680..1209964 (+) | 285 | WP_010317449.1 | integration host factor subunit beta | - |
| ACEO96_RS05590 (ACEO96_05590) | - | 1210106..1210381 (+) | 276 | WP_017044598.1 | LapA family protein | - |
| ACEO96_RS05595 (ACEO96_05595) | lapB | 1210401..1211570 (+) | 1170 | WP_026028046.1 | lipopolysaccharide assembly protein LapB | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10774.72 Da Isoelectric Point: 9.6909
>NTDB_id=1044824 ACEO96_RS05570 WP_373433358.1 1206686..1206985(+) (comEA) [Vibrio anguillarum strain VA1]
MKLKTKLGLLLLSIVLPLSPALAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
MKLKTKLGLLLLSIVLPLSPALAEEKVVETHQGIEITVNINQASAEEIATLLKGIGLKKAQAIVEYRQQNGDFKTKEDLS
LVKGIGAVTVRQNAERIIL
Nucleotide
Download Length: 300 bp
>NTDB_id=1044824 ACEO96_RS05570 WP_373433358.1 1206686..1206985(+) (comEA) [Vibrio anguillarum strain VA1]
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGGCATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
ATGAAATTGAAAACAAAACTCGGGTTGTTACTTCTAAGTATCGTATTGCCTCTTTCACCGGCATTAGCAGAAGAAAAGGT
GGTAGAAACGCACCAAGGCATTGAAATTACGGTTAATATAAATCAGGCTTCCGCTGAGGAAATTGCTACTTTGTTGAAAG
GTATTGGACTTAAAAAAGCACAAGCGATTGTTGAATATCGTCAACAAAATGGCGATTTTAAAACCAAAGAAGATCTGAGC
TTGGTGAAAGGCATTGGTGCCGTTACTGTCAGGCAAAACGCTGAGCGTATCATTTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
59.223 |
100 |
0.616 |
| comEA | Vibrio cholerae strain A1552 |
59.223 |
100 |
0.616 |
| comEA | Vibrio campbellii strain DS40M4 |
57.732 |
97.98 |
0.566 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
58.889 |
90.909 |
0.535 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
39.286 |
100 |
0.444 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| comEA | Legionella pneumophila str. Paris |
36.735 |
98.99 |
0.364 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.735 |
98.99 |
0.364 |