Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   QOR61_RS03955 Genome accession   NZ_OX460960
Coordinates   698162..698341 (+) Length   59 a.a.
NCBI ID   WP_283572439.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate MRI Z2-299     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 693162..703341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOR61_RS03925 - 693477..695468 (+) 1992 WP_283572437.1 DUF859 family phage minor structural protein -
  QOR61_RS03930 - 695480..695872 (+) 393 WP_000889196.1 DUF1366 domain-containing protein -
  QOR61_RS03935 - 695895..696023 (+) 129 WP_283572408.1 hypothetical protein -
  QOR61_RS03940 - 696032..696334 (+) 303 WP_001018078.1 hypothetical protein -
  QOR61_RS03945 - 696327..696554 (+) 228 WP_000609114.1 phage holin -
  QOR61_RS03950 - 696682..698025 (+) 1344 WP_283572438.1 GH25 family lysozyme -
  QOR61_RS03955 prx 698162..698341 (+) 180 WP_283572439.1 Paratox Regulator
  QOR61_RS03960 - 698441..698782 (-) 342 WP_255872318.1 hypothetical protein -
  QOR61_RS03965 - 698698..699021 (-) 324 WP_233263921.1 tyrosine-type recombinase/integrase -
  QOR61_RS03970 - 699057..699323 (-) 267 WP_283572440.1 integrase -
  QOR61_RS03975 - 699344..700706 (+) 1363 Protein_698 IS3 family transposase -
  QOR61_RS03980 - 700879..701040 (-) 162 WP_000508795.1 NINE protein -
  QOR61_RS03985 - 701782..703059 (+) 1278 WP_000594360.1 ABC transporter permease -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6968.98 Da        Isoelectric Point: 4.3855

>NTDB_id=1043971 QOR61_RS03955 WP_283572439.1 698162..698341(+) (prx) [Streptococcus agalactiae isolate MRI Z2-299]
MLYIDELQEAIDKGYISGNTVMIVRKNGQIFDYVLPHEKVRDDEVVTVERVEDVMRELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1043971 QOR61_RS03955 WP_283572439.1 698162..698341(+) (prx) [Streptococcus agalactiae isolate MRI Z2-299]
ATGTTATATATAGATGAGCTACAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTGATGATTGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTACCACACGAAAAAGTGAGAGATGATGAGGTTGTGACAGTTGAGAGAGTGGAAGACG
TTATGAGAGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.966

98.305

0.678
  prx Streptococcus pyogenes MGAS8232

68.966

98.305

0.678
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

86.047

72.881

0.627
  prx Streptococcus pyogenes MGAS315

73.81

71.186

0.525
  prx Streptococcus pyogenes MGAS315

75.61

69.492

0.525