Detailed information NTG1042993

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: QOR55_RS01130
• Genome accession: NZ_OX460911
• Coordinates: 191001..191462 (+)
• Length: 153 a.a.
• NCBI ID: WP_001874060.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae isolate MRI Z2-322
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 186001..196462

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR55_RS01100	-	187617..187982 (+)	366	WP_000285373.1	DUF1033 family protein	-
QOR55_RS01105	comGA	188154..189125 (+)	972	WP_000250799.1	competence type IV pilus ATPase ComGA	Machinery gene
QOR55_RS01110	comGB	189019..190062 (+)	1044	WP_228322108.1	competence type IV pilus assembly protein ComGB	Machinery gene
QOR55_RS01115	comGC/cglC	190059..190388 (+)	330	WP_000793380.1	competence type IV pilus major pilin ComGC	Machinery gene
QOR55_RS01120	comGD	190363..190776 (+)	414	WP_017646959.1	competence type IV pilus minor pilin ComGD	Machinery gene
QOR55_RS01125	comGE	190748..191047 (+)	300	WP_025195478.1	competence type IV pilus minor pilin ComGE	Machinery gene
QOR55_RS01130	comGF	191001..191462 (+)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
QOR55_RS01135	comGG	191440..191811 (+)	372	WP_000601103.1	competence type IV pilus minor pilin ComGG	Machinery gene
QOR55_RS01140	comGH	191926..192900 (+)	975	WP_001008568.1	class I SAM-dependent methyltransferase	Machinery gene
QOR55_RS01145	-	192932..194125 (+)	1194	WP_000047537.1	acetate kinase	-
QOR55_RS01150	-	194277..194483 (+)	207	WP_000798241.1	helix-turn-helix transcriptional regulator	-
QOR55_RS01155	-	194542..194679 (+)	138	WP_079263416.1	hypothetical protein	-
QOR55_RS01160	-	194782..195174 (+)	393	WP_001265365.1	hypothetical protein	-
QOR55_RS01165	-	195243..195908 (+)	666	WP_000008107.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17861.86 Da
• Isoelectric Point: 9.8392

>NTDB_id=1042993 QOR55_RS01130 WP_001874060.1 191001..191462(+) (comGF) [Streptococcus agalactiae isolate MRI Z2-322]
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=1042993 QOR55_RS01130 WP_001874060.1 191001..191462(+) (comGF) [Streptococcus agalactiae isolate MRI Z2-322]
TTGAAGGTAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAGAATGTTTGGTAGCATT
GGTTACAATTACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTTGAAGGCGCTCATCTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAAACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373