Detailed information NTG1042429

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB9L17_RS20750
• Genome accession: NZ_CP168124
• Coordinates: 4013539..4014120 (+)
• Length: 193 a.a.
• NCBI ID: WP_068985964.1
• Uniprot ID: -
• Organism: Bacillus sp. RS11
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4008539..4019120

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9L17_RS20725 (AB9L17_20730)	-	4009355..4009969 (+)	615	WP_068985960.1	spore coat protein	-
AB9L17_RS20730 (AB9L17_20735)	-	4010028..4010750 (-)	723	WP_375199738.1	amino acid ABC transporter ATP-binding protein	-
AB9L17_RS20735 (AB9L17_20740)	-	4010747..4011451 (-)	705	WP_068985962.1	amino acid ABC transporter permease	-
AB9L17_RS20740 (AB9L17_20745)	-	4011702..4012502 (-)	801	WP_068985963.1	basic amino acid ABC transporter substrate-binding protein	-
AB9L17_RS20750 (AB9L17_20755)	clpP	4013539..4014120 (+)	582	WP_068985964.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AB9L17_RS20755 (AB9L17_20760)	-	4014313..4014912 (+)	600	WP_375199739.1	hypothetical protein	-
AB9L17_RS20760 (AB9L17_20765)	-	4014918..4015175 (-)	258	WP_068985967.1	HPr family phosphocarrier protein	-
AB9L17_RS20765 (AB9L17_20770)	whiA	4015290..4016237 (-)	948	WP_068985968.1	DNA-binding protein WhiA	-
AB9L17_RS20770 (AB9L17_20775)	yvcK	4016308..4017303 (-)	996	WP_223553850.1	YvcK family protein	-
AB9L17_RS20775 (AB9L17_20780)	rapZ	4017308..4018201 (-)	894	WP_068985970.1	RNase adapter RapZ	-
AB9L17_RS20780 (AB9L17_20785)	-	4018211..4018678 (-)	468	WP_068985971.1	NUDIX domain-containing protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21269.58 Da
• Isoelectric Point: 4.7383

>NTDB_id=1042429 AB9L17_RS20750 WP_068985964.1 4013539..4014120(+) (clpP) [Bacillus sp. RS11]
MNLIPTVIEQTSRGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDIFLYINSPGGSITAGMAIYDT
MQIIKPQVQTICIGMAASMGAFLLAAGEPGKRFALPNAEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNGILSERTGQ
PLEVISRDTDRDNFMTAERAKEYGLIDQIMERK

Nucleotide

• Length: 582 bp

>NTDB_id=1042429 AB9L17_RS20750 WP_068985964.1 4013539..4014120(+) (clpP) [Bacillus sp. RS11]
ATGAATTTAATTCCTACAGTTATTGAACAAACAAGTCGTGGTGAACGTGCTTATGACATCTATTCACGACTACTAAAAGA
CCGTATTATTTTATTAGGAAGCGCGATTGACGACAATGTAGCTAACTCCATTGTTGCTCAGCTTCTATTCCTACAAGCAG
AAGATCCAGATAAAGATATCTTTCTTTACATCAACTCACCAGGCGGATCAATCACTGCTGGTATGGCAATTTATGACACA
ATGCAAATCATTAAGCCACAAGTACAAACAATTTGTATTGGTATGGCAGCATCTATGGGTGCTTTCCTACTTGCTGCTGG
TGAACCTGGTAAACGCTTCGCATTACCAAATGCCGAAGTAATGATTCACCAACCTCTTGGCGGTGCACAAGGTCAAGCAA
CTGAGATTGAAATCGCTGCAAAACGTATTTTATTCTTACGCGAAAAATTAAATGGCATTTTATCAGAACGCACTGGTCAA
CCGCTTGAAGTAATTTCAAGAGATACAGATCGCGATAACTTCATGACTGCTGAGCGTGCCAAAGAATACGGCTTAATCGA
TCAAATTATGGAACGCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	86.842	98.446	0.855
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.421	98.446	0.674
clpP	Lactococcus lactis subsp. cremoris KW2	59.686	98.964	0.591
clpP	Streptococcus thermophilus LMG 18311	60	98.446	0.591
clpP	Streptococcus thermophilus LMD-9	60	98.446	0.591
clpP	Streptococcus pneumoniae Rx1	58.947	98.446	0.58
clpP	Streptococcus pneumoniae D39	58.947	98.446	0.58
clpP	Streptococcus pneumoniae R6	58.947	98.446	0.58
clpP	Streptococcus pneumoniae TIGR4	58.947	98.446	0.58
clpP	Streptococcus mutans UA159	57.812	99.482	0.575
clpP	Streptococcus pyogenes JRS4	57.592	98.964	0.57
clpP	Streptococcus pyogenes MGAS315	57.592	98.964	0.57
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	57.592	98.964	0.57