Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | R8721_RS04090 | Genome accession | NZ_AP028321 |
| Coordinates | 834255..834575 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain RYU-Ah62 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 829255..839575
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8721_RS04070 (Ri1_07610) | - | 829552..830229 (-) | 678 | WP_010636284.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| R8721_RS04075 (Ri1_07620) | - | 830585..831556 (+) | 972 | WP_005309570.1 | response regulator | - |
| R8721_RS04080 (Ri1_07630) | - | 831638..833035 (-) | 1398 | WP_005309573.1 | peptide MFS transporter | - |
| R8721_RS04085 (Ri1_07640) | galU | 833249..834160 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| R8721_RS04090 (Ri1_07650) | comEA | 834255..834575 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| R8721_RS04095 (Ri1_07660) | cysQ | 834742..835512 (+) | 771 | WP_010636287.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| R8721_RS04100 (Ri1_07670) | - | 835591..835887 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| R8721_RS04105 (Ri1_07680) | - | 835912..836475 (-) | 564 | WP_005309592.1 | septation protein A | - |
| R8721_RS04110 (Ri1_07690) | - | 836580..838085 (-) | 1506 | WP_010636288.1 | pyridoxal-dependent decarboxylase | - |
| R8721_RS04115 (Ri1_07700) | - | 838304..838939 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=104190 R8721_RS04090 WP_005309580.1 834255..834575(-) (comEA) [Aeromonas dhakensis strain RYU-Ah62]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=104190 R8721_RS04090 WP_005309580.1 834255..834575(-) (comEA) [Aeromonas dhakensis strain RYU-Ah62]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCCAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCCAATCGGGACATGATCATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |